Gene Tmz1t_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1518 
Symbol 
ID7083600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1696391 
End bp1697428 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content67% 
IMG OID643698535 
Productinner-membrane translocator 
Protein accessionYP_002355172 
Protein GI217969938 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGT CAATTGCATT GATCCTGTCG CAGGACGGGA TCACCAACGG CGCGATCTAC 
GCGCTGCTGG CGCTGGCGCT GGTGCTGGTG TTCGCGGTCA CGCGGGTGAT CTTCATCCAG
CAGGGCGAGT TCGTGGCCTA CGGGGCGCTG ACGCTGGCGA TGATGCAGTC GGGCGTGTTG
CCGGCCACGG TGTGGATGCT GGTGGCGATG GGAGCGCTGG TCACGGTGCT CGACGGCGGG
CTCGCGCTCA AGGCGGGGCA GGGCCGGCGT GCCGCGAGCG TGGCGGGCTG GAACCTGGGC
TATCCGCTGG CGCTCGCCGC GGTGGTCGGC GGGCTGGCGG TCAAGGAGCT GCCGCTGGCG
GTGCAGGTGC TGCTGACGCT GGCGATCGTG GTGCCGATGG GGCCGATGAT GTACCGCCTG
ATGTACCAGC CGATCGCATC GGCGCCGGTG CTGGTGCTCC TGATCGTCTC GGTGGCGCTG
CATATCGCGA TGGTGGGCCT GGGACTGCTG TTCTTCGGAG CGGAAGGCCA GCGCACCCCG
GCGTTCAGCG AGTTCAGCCT CGAGCTCGGC CCGCTGATGG TCTCCGCGCA GACGCTGTGG
GTGGTGGTGG TGTCGGTGCT GCTGATCGTG GCGCTGTACC AGTTCTTCGA ACGCACGCTC
TACGGCAAGG CCTTGCGCGC CACCGCGATC AACCGCGTCG GCGCCCAGCT CATGGGGATC
TCGCCCACGC TCGCCGGCAA GCTGACGTTC TTCCTCGCCG CCTTCATCGG TGCGCTCTCG
GGCGTGCTGA TCGCCCCGAT CACCACGATC TACTACGACA CCGGCTTCCT GATCGGCCTC
AAGGGGTTCG TCGCCGCCAT CATCGGCGGC CTGGCGAGTT ATCCGCTGGC CGCCGTGGGT
GCGCTCGCCG TGGGGCTGCT CGAAGCCTTC GCGTCGTTCT GGGCCAGCGC CTACAAGGAA
GTCATCGTGT TCACCCTGAT CATTCCCGTG CTGCTGTGGC GCTCGCTGCG TAGCCACCAC
GTGGAGGAAG AAGAATGA
 
Protein sequence
MDMSIALILS QDGITNGAIY ALLALALVLV FAVTRVIFIQ QGEFVAYGAL TLAMMQSGVL 
PATVWMLVAM GALVTVLDGG LALKAGQGRR AASVAGWNLG YPLALAAVVG GLAVKELPLA
VQVLLTLAIV VPMGPMMYRL MYQPIASAPV LVLLIVSVAL HIAMVGLGLL FFGAEGQRTP
AFSEFSLELG PLMVSAQTLW VVVVSVLLIV ALYQFFERTL YGKALRATAI NRVGAQLMGI
SPTLAGKLTF FLAAFIGALS GVLIAPITTI YYDTGFLIGL KGFVAAIIGG LASYPLAAVG
ALAVGLLEAF ASFWASAYKE VIVFTLIIPV LLWRSLRSHH VEEEE