Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1516 |
Symbol | |
ID | 7083598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1694114 |
End bp | 1694929 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643698533 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002355170 |
Protein GI | 217969936 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.371505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGACG AACTCGACGG CAAGCACGGC GTGCAATCTC TCGAGGTGGG CATGAGCATC CTCCGCGCCA TGGTCACCGG CAAGCGCTCC ATGATGCTCA AGGACATCGC CCAGGCCGCC GACATGCCGC CCTCGAAGGC GCACCGCTAC CTGGTCAGCC TGATCCGCAG CGGACTCGTC GAACAGGACC GGCTCACCTC GCGCTACGAC CTCGGTCCCT TCGCCCTCAA CCTCGGCCTG GTCGCCCTCG ACCGCGTCGA CCGGATCCGT CTCGGCTTGA GCGCGATCGG CGATTTGCGC GATCTCACCA ACGAGACCGT CGCGCTCGCC GTCTGGAGCG ATCGAGGGCC GGTCGTCGTG CGCTGGGAGC GTCCCCGTCG TCCGATCACC GTCAATGTGC TGACCGGCAC CAGCCTCAGC CTGCTGAGCT CGGCCGCCGG GCGCGTCTTC GCCGCATGGC TGCCCGAGCA GCAGACCGAA GCGCTGCTGC GCGCCGAGCT CGAATCCGGT CGGGTGCCCG CGGGCCTTGC CACCCTCGAC GACGCGCGCC GGCTGCTCGC CGAGGTCCGC GCGCGGGGTG TGGCGGTGAT TTCCAGCGGC TATTTCGCCC GCGGCGTCGA GGCTGCGGCG GCCCCGGTGT TCAACTTCAA GAACGAGATC AACATGAGCA TCGCCCTCGT GGGCGTCGAG GGCACGCTGG ATCTCCTCCC GCACAGTCCC GTGCTCCAGG CGCTGAAGGA GGCCTGCGAC GCGCTGTCGC GGCGACTCGG CGCGACCCTT CTCCCGGGTG TCGAGTCGGG CGACCACGCG ACCTGA
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Protein sequence | MSDELDGKHG VQSLEVGMSI LRAMVTGKRS MMLKDIAQAA DMPPSKAHRY LVSLIRSGLV EQDRLTSRYD LGPFALNLGL VALDRVDRIR LGLSAIGDLR DLTNETVALA VWSDRGPVVV RWERPRRPIT VNVLTGTSLS LLSSAAGRVF AAWLPEQQTE ALLRAELESG RVPAGLATLD DARRLLAEVR ARGVAVISSG YFARGVEAAA APVFNFKNEI NMSIALVGVE GTLDLLPHSP VLQALKEACD ALSRRLGATL LPGVESGDHA T
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