| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1511 |
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| Symbol | |
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| ID | 7083593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1687862 |
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| End bp | 1689421 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643698528 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | YP_002355165 |
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| Protein GI | 217969931 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.131769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTGA CCGACACCCA GATCTCCAAG TCCGCCGCGC AGCCGCTGCC CGCCTCGGCT
GTCGTCGCCG TGGTCGGCAC CGGCGCCATG GGCGCCGGCA TCGCCCAGGT GGCGGCCGCG
GCCGGCCACG TGGTCAAGCT GCTCGACAAC CGTCCGGGCG CCGCCGCCAA GGCGATCGAA
GGCATCCGTG CCCAGTTCGG CAAGCTCGCC GACAAGGGCA AGATGAGCAC CGAAGCCGCG
CAGGCGGCCG CTGAACGCCT GATCGCCGTC GACCAGCTGG CCGAGCTCGC CGACGCCGCA
CTGGTGGTCG AGGCCATCGT CGAGAACCTC GAAGCCAAGC AGAAGCTGTA CGGCGACCTG
GAGAACATCG TCGGCGCCGA CTGCATCTTC GGCACCAACA CCTCGTCGAT CTCGGTGACC
TCGATCGGCG CCGCCCTGCA GCGCCCCGAA CGCCTGGCCG GCCTGCACTT CTTCAACCCG
GCGCCGCTGA TGAAGCTGGT CGAGATCGTC TCCGGCCTCG CCACCGCGCG CGTGGTCGCC
GACACCCTGT TCGCCACCGC CGCGGCCTGG GGCAAGACGC CGGTGCATGC GCGCTCGACG
CCGGGCTTCA TCGTCAACCG CGTCGCCCGT CCCTACTACG CCGAGGCGCT GCGCATCCTC
AACGAAGGCG GTGGCGACTG CGCCACACTC GACGCGATCA TGCGCGACGC CGGCGGTTTC
CGCATGGGGC CGTTCGAGCT GATGGACATG ATCGGCCACG ACGTCAATTT CGCCGTCACA
CGCTCGGTGT GGAACGCCTT CTACAACGAT GCGCGCTTCA CGCCCTCGCT GATCCAGCAG
GAGCTGGTCG ACGCCGGCTT TTTCGGTCGC AAGTCGGGCC GCGGCTTCTA CGACTACCGC
GAGGGCGCCG CGCGCCCCGC ACCCCAGGTC GCGGTGGCGC AGCACGCACC GGACGAGATC
GTGCTCCACG GCCATTCGGC CGCCGTGCAT GCGCTCGCCG ACCGCCTCTT CGAGCGCAAC
ATCCCCCATA CCTGGGGCGA AGCCAACGAC GGTCGCATCG CCGAGACGGG AGGCGCGGTG
ATCTTCGTCA CCGACGGCCG CACCGCCACG CAACGCGCCA CCGAGATGGG CATCGCCAAC
GTGGTGCTGA TCGACCTCGC ACTGGACTAC GCCACCGCCG GCCGCATCGC GGTCGGCGCC
GCGATCAACT GCTTCGCGCC CGCGGTCGGC GCCGCGATCA GCCTGCTGCA GGCGGCCGGC
TTCGAGGTCT GCCGCCTGGG CGACACCCCG GGACTGGCAG TGATGCGCAC CGTCGCGATG
CTCGCCAACG AAGCGGCCGA CGCGGTCAAC CAGGGGGTGT GCGATGCCGC CGGCGCCGAT
GCGGCGATGA AGCTCGGGGT CAATTACCCG CGCGGACCGC TGGAATGGGC CGACCGCGTC
GGCCTGCCGG CGATCTGCGC CGTACTCGCC AACCTCGCCC GCTTCTATGG CGAGGACCGC
TATCGCGTGT CCCCGCTGAT CCAGCAGCGC GTGTTCGCCG GAAAGAAGAT CCATGACTGA
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| Protein sequence | MSVTDTQISK SAAQPLPASA VVAVVGTGAM GAGIAQVAAA AGHVVKLLDN RPGAAAKAIE
GIRAQFGKLA DKGKMSTEAA QAAAERLIAV DQLAELADAA LVVEAIVENL EAKQKLYGDL
ENIVGADCIF GTNTSSISVT SIGAALQRPE RLAGLHFFNP APLMKLVEIV SGLATARVVA
DTLFATAAAW GKTPVHARST PGFIVNRVAR PYYAEALRIL NEGGGDCATL DAIMRDAGGF
RMGPFELMDM IGHDVNFAVT RSVWNAFYND ARFTPSLIQQ ELVDAGFFGR KSGRGFYDYR
EGAARPAPQV AVAQHAPDEI VLHGHSAAVH ALADRLFERN IPHTWGEAND GRIAETGGAV
IFVTDGRTAT QRATEMGIAN VVLIDLALDY ATAGRIAVGA AINCFAPAVG AAISLLQAAG
FEVCRLGDTP GLAVMRTVAM LANEAADAVN QGVCDAAGAD AAMKLGVNYP RGPLEWADRV
GLPAICAVLA NLARFYGEDR YRVSPLIQQR VFAGKKIHD
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