Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1500 |
Symbol | |
ID | 7083582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1676566 |
End bp | 1677306 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643698517 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002355154 |
Protein GI | 217969920 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0500353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCAC GATTCCACTT TCCGGATCGC CTGCCTGCGG GCGGCGAGGT GGCGCTCCCC GAGGCGCTCG CCCACCATGC GCTGCGGGTG TTGCGCCTGC GCGATGGCGA GGCGGTGGTG CTGTTCGACG GCAGCGGCGG AGAGGTCGAT GCGCGCCTGG CCGTGCGCGG CAAGGCGGTG TTCGCTCGGC TCGGCGAGGC GCGTGCGGTC GAACGCGAGT CGCCCTTGCG CATCGTGCTG GTGCAGGCGC TGGCCTCGGG CGACAAGATG GACTGGGTGG TGCAGAAGGC GGTGGAGCTC GGCGTGCATG CGATCCAGCC GGTGCAGGCC GAGCGCTCGG TGCTGCGTCT GGCGGCCGAG CGTGCCGACA AGCGCGTCGC GCACTGGCAG CAGGTCGCGA TCGCGGCCTG CGAGCAGTGC GGGCGCAACC GCGTCCCCGA GATCCGCCCC CTGCAGCCGC TCGCACACTG GCTGGGCGCG CATCGCGCTG CGCCCGGCTA CGTGCTTGCG CCCGGCTACG TGCTTGCGCC CGGCGGGGCC AAGGGCTTTG CCGACGAACC CGAGCCGAAG GACGAGGTGC ACCTGCTGGT CGGGCCGGAG GGTGGCTGGA GCGAGGGCGA GATGGCGGCC TTCGACGCCG CCGGTTGCCG GCGCGTGCGG CTCGGGCCGC GCGTGCTGCG CACCGAGACC GCGGGCCTCG CCGCCGTGGC GGCGCTGCAG GCGCGCTGGG GCGATTATTG A
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Protein sequence | MISRFHFPDR LPAGGEVALP EALAHHALRV LRLRDGEAVV LFDGSGGEVD ARLAVRGKAV FARLGEARAV ERESPLRIVL VQALASGDKM DWVVQKAVEL GVHAIQPVQA ERSVLRLAAE RADKRVAHWQ QVAIAACEQC GRNRVPEIRP LQPLAHWLGA HRAAPGYVLA PGYVLAPGGA KGFADEPEPK DEVHLLVGPE GGWSEGEMAA FDAAGCRRVR LGPRVLRTET AGLAAVAALQ ARWGDY
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