| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1492 |
|---|
| Symbol | |
|---|
| ID | 7083574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1665944 |
|---|
| End bp | 1666708 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643698509 |
|---|
| Product | fumarate reductase cytochrome b-556 subunit |
|---|
| Protein accession | YP_002355146 |
|---|
| Protein GI | 217969912 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTCC CGCGACCTTG CGCAGCTTCG GCCGCCTCGC CCTGGCCGGC ACGCCTGGAT
CTGCTCCAGA GCCTGTCCGG CCTCGCCCTC GCCCTCTTCA TGTGGCTGCA CATGGGCTTC
GTGTCCGCGA TCCTGATCAG CGCGGACTTC GCGTGGGCGG TGGCGCGTTT CTTCGAGGGC
TACTTCTTCC TGCCGCGTCC GCAGGCGTGG CTGGTGACGG CCTTCGTCGC TTCGATCGCG
CTCCTGTTCG CCCTGCATGC GCTGCTGGCG CTGCGCAGGT TTCCCGCCGA CTGGCGCCAG
TACCGCATCG CCGCGCGCCA CGGCAGCCGT CTGCGCCATG GCGACACGAC GCTTTGGTTC
GTGCAGGTGG CGACCGGCTT CGCGATGTTC TTCCTCGCGC CGGTGCATCT GTACGCCATG
TTCATGCATC CCGACCTCAT CGGCCCTTAC GAATCCGCCG ATCGCGTGTG GACCGGCGGC
TTCTGGCCGC TCTATCTCGC CTTGCTGTTC GCAGTCGAGG TGCATGGCAG CGTGGGCCTG
TACCGCCTGG CGGTGAAGTG GGGCTGGTTC GAGGGCCGCG ACGCGCGTAC GACGCGGCGC
CGGCTGAAGC TGGCGATGTG GGGCCTGATC GCCTTCCTGC TCACGCTGGG GCTGACCACG
CTGTTGGCGG AGATCCGCAT GGGCATCGAG CATGCGCCAC GCGCCGGCGA GCGCTACGTG
CCGACCTGGC AGCGCAGCCC GACTGCGGTG GAGGAGGCGC GATGA
|
|---|
| Protein sequence | MTLPRPCAAS AASPWPARLD LLQSLSGLAL ALFMWLHMGF VSAILISADF AWAVARFFEG
YFFLPRPQAW LVTAFVASIA LLFALHALLA LRRFPADWRQ YRIAARHGSR LRHGDTTLWF
VQVATGFAMF FLAPVHLYAM FMHPDLIGPY ESADRVWTGG FWPLYLALLF AVEVHGSVGL
YRLAVKWGWF EGRDARTTRR RLKLAMWGLI AFLLTLGLTT LLAEIRMGIE HAPRAGERYV
PTWQRSPTAV EEAR
|
|---|
| |