| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1454 |
|---|
| Symbol | |
|---|
| ID | 7083537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1620680 |
|---|
| End bp | 1623190 |
|---|
| Gene Length | 2511 bp |
|---|
| Protein Length | 836 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643698472 |
|---|
| Product | Organic solvent tolerance protein |
|---|
| Protein accession | YP_002355109 |
|---|
| Protein GI | 217969875 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1452] Organic solvent tolerance protein OstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.591855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCGA ATACGCGCAT TCGACTGATT CCACTGCTCC TGCTGGGCCT GTCGGGCGCT
GCATTCGCGC AAACCATGCC CGCGCTTCGG GTGGCGCCCG AGCTGCTGCG CCAGGCGTCG
CCGGCCACGC CGGAGCGACC CGCGACGCCG GTGCAGGCCT CCCCCGCGGC GGCCTCTGCC
ACGCCACCCC CGGCCGCACC CGCTCCGACC CCGGCGCCCG TCTCCGCACC CGCGGCCGTC
GCACCCGCAC CGGCACCCGC ACCCGCACCC GCGGCCCTCG CCAAGCCGCC GGTGGTCGCC
GCGCCTGCCC CCGCCGTCGA GCGACCCGCG CTCGCCCCGG GCGAGACCGC GGTCAGCGCG
CTGCGCATCC ATGGCGAGCG CGGGATCGAG CTGGTCGCCG AGGGCGAGGC CGAGCTGCAG
CGCGACGACA CCCTGCTCAC CGCCGACCGC GTCACCTATC GCGAGCCGAC CGACGAGGTG
CTCGCCGAGG GGCACGTGGT GCTGAGCCGA GGTGGCGACA CGATCCGCGG GCCGAAGGCC
ACGCTGGTGG TGGGCGACCG TGTCGGCAGC TTCGAGACGC CGACCTACGA GCTCTCGCGT
GCGCGTCCGC CCGCGCTCGC CGGCGACGCC CCGCGCACCG TGGCCGGCAG CGGCCAGGCC
GATCTGCTGC GCCTGGAGGG CGAGAACCAG TACCGCCTCG CCAACGCGAC CTGGACCACC
TGCAGCCCGC AGGACCCGGA CTGGTACATC AAGGCGCGCG AGCTCGAGCT CGACTACGAC
CGCGAGGTCG GCACCGCCCA CGCCAGCTCG ATCGTGTTCA TGGACACGCC GATCTTCTGG
ATGCCCTGGG CCGAATTCCC GCTCAGCGGC CAGCGCCAGT CGGGGCTGCT GCCGCCCACC
TTCGGCTCGT CGAACAAGAC CGGGGTGGAC TTCACCCAGC CGTACTACTG GAATATCGCA
CCCAACTACG ACGCGACCCT GGCGCCGCGC ATCATGACCC GGCGCGGCGT CCAGTTCGGC
GGCGAGTTGC GCTATCTCGG CGAGGACTCC CAGGGCACCA CGCGCCTCGA GTGGATGCCG
AACGACAAGG TGACCGGCGA GGAGCGCAGG CTCGGCTCGA TCCAGCACCA GCAGCGCTTC
GCCCCCAACT TCTACGGCAC GCTCGATCTC AACGCGGTGT CCGACGACGG CTACTTCGAG
GACCTGTCCT CCAACATCGG CGTGGCCTCG CGGGTCAACC TGCTGCGCGA GGGGCGGCTG
ATCTACACGG GCGGCTGGTG GACCGCCTCC GCGCTGGCGC AGCGCTACCA GACGCTGAAC
CCGGATCCGG ACGTGCGCAA CGTCGAGCCC TATCGCCGCC TGCCGCAGTT GCGCCTCGAC
GCCGTGCGCG CCGACCTCGC CGGCGGCATG GCCGGCCTGC TCGAGACCGA GTTCGTCCGT
TTCGCCCATC GCGAGAGGGA TCGCGACGAG GCCGCGCGCG TCGTCGCCTA TCCGCAGCTG
TCGTTGCCGA TGCAGGGCGC GGCCTGGTTC GTCACGCCCA AGGCGGGCGT GCATTACACC
AGCTACGACA TCGACCGCGT CGCGGCGACT TCCGGCAAGC CCGAATCGAT CACGCGCTCG
GTCCCGATCG TCTCGCTCGA CTCCGGCCTG TTCTTCGAGC GCGAGACGAA CTATTTCGGC
AGCGACTACC TGCAGACGCT CGAGCCGCGG CTGTTCTACC TGCGCGTGCC GAGCCGCGAG
CAGTCGGACA TCCCGCTCTT CGACACCAAC CGCTTCGACG TCGGTTTCGC GCAGATCTTC
GCCGAGAACC GCTACTCGGG CAGCGACCGC ATCGGCGACG CCAACGACCT CACCGCGGCG
CTTACCACCC GCTTCATCGA TGCGGAGACC GGGGTCGAGC GCCTGCGCGC GCTGATCGGC
CAGCGCTACT ACTTCTCCGA CCAGAAAGTC TATCTGTACG ACGAGGACGA ACTGCGCCGC
GCCGGCACCG GCAACGAAAT CCTCGCCGGT CTCGGCGGAC GCATCACCAG CACGGTGACG
GTGGATTCCT ACGCCCAGTA CAACACCGAG ACCAGCCGCA CCGAGCGCCT CAACGCGAGC
GTGCGCTACC AGCCCGGCTT CGCGCGCACC CTCAACCTGA GCTACCGCTA CGCGCCCAAC
CTGCGTGTCG ATCAAGACAT CGTCGGCCTC GAGGACATCG ACGTCTCCGG CCAGTGGCCG
CTCGCGCGCC AGTGGTACGG CGTCGGTCGA GTCACCCACT CGCTCAAGGA CGACCGCATC
ACCGAGGCGG TCGCGGGTAT CGAGTACGAC GGCGGCTGCT GGGTGTTCCG CACCGCGGTG
CATCGCTTCG CGATCGACGA GGACGACGTG ACCAACGCCA TCTTCATCCA GCTCGAACTG
AACGACCTCG CCGGGATCGG CTCGAATCCG CTCAGCCTGA TCAAGCGCAG CGTCCCCGGC
TATGGCAAGA TCAACGACTC CTCGGCCAAC CGCGTGTTCG GCAACAACTG A
|
|---|
| Protein sequence | MLPNTRIRLI PLLLLGLSGA AFAQTMPALR VAPELLRQAS PATPERPATP VQASPAAASA
TPPPAAPAPT PAPVSAPAAV APAPAPAPAP AALAKPPVVA APAPAVERPA LAPGETAVSA
LRIHGERGIE LVAEGEAELQ RDDTLLTADR VTYREPTDEV LAEGHVVLSR GGDTIRGPKA
TLVVGDRVGS FETPTYELSR ARPPALAGDA PRTVAGSGQA DLLRLEGENQ YRLANATWTT
CSPQDPDWYI KARELELDYD REVGTAHASS IVFMDTPIFW MPWAEFPLSG QRQSGLLPPT
FGSSNKTGVD FTQPYYWNIA PNYDATLAPR IMTRRGVQFG GELRYLGEDS QGTTRLEWMP
NDKVTGEERR LGSIQHQQRF APNFYGTLDL NAVSDDGYFE DLSSNIGVAS RVNLLREGRL
IYTGGWWTAS ALAQRYQTLN PDPDVRNVEP YRRLPQLRLD AVRADLAGGM AGLLETEFVR
FAHRERDRDE AARVVAYPQL SLPMQGAAWF VTPKAGVHYT SYDIDRVAAT SGKPESITRS
VPIVSLDSGL FFERETNYFG SDYLQTLEPR LFYLRVPSRE QSDIPLFDTN RFDVGFAQIF
AENRYSGSDR IGDANDLTAA LTTRFIDAET GVERLRALIG QRYYFSDQKV YLYDEDELRR
AGTGNEILAG LGGRITSTVT VDSYAQYNTE TSRTERLNAS VRYQPGFART LNLSYRYAPN
LRVDQDIVGL EDIDVSGQWP LARQWYGVGR VTHSLKDDRI TEAVAGIEYD GGCWVFRTAV
HRFAIDEDDV TNAIFIQLEL NDLAGIGSNP LSLIKRSVPG YGKINDSSAN RVFGNN
|
|---|
| |