| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1445 |
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| Symbol | |
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| ID | 7083528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1610743 |
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| End bp | 1611783 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698463 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002355100 |
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| Protein GI | 217969866 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTG CCGGCTTCAC CCTGCGCAAC AACCTCTTCG TCGCCCCCAT GGCCGGCGTG
ACGGACCGCC CCTTCCGCCA GCTCTGCAAA AAGCTGGGCG CAGGCGTCGC CGTATCCGAG
ATGGTCACCT CCAATTCGCT GCTCTACGGC AGCGAGAAGA CCCGCCGCCG CGCCGACCAT
ACCGGCGAGG TCGATCCGAT CTCGGTGCAG ATCGCCGGCG CCGATCCGGC GATGATGGCC
GAAGCCGCGA AGTTCAACGC CGACAACGGC GCGCAGATCA TCGACATCAA CATGGGCTGC
CCGGCCAAGA AGGTGTGCAA CGTGATGGCC GGCTCGGCGC TGATGCAGGA CGAGCCGCTG
GTCGCGCGCA TCCTCGAGGC CGTAGTCAAG GCGGTGCCCG ATACCCCAGT CACGCTCAAG
TTCCGCACCG GCTGGAACCG CGCCAACAAG AACGCGCCGA CGATCGCGCG CATCGCCGAG
GAGTCCGGCA TCCGCGCCAT CGCCATCCAC GGCCGTACCC GGGCCGACCA GTACATGGGC
GAGGCGGAGT ACGACACCAT CGCCCACGTC AAGACCCTCG TGAACATCCC GGTGATCGCC
AACGGCGACA TCGGCAGCCC GCAGAAAGCC AAGCACGTGC TCGACTACAC CGGCGCCGAC
GGCGTCATGA TCGGGCGCGC GGCGCAGGGC CGGCCGTGGA TCTTCCGCGA GATCGAGCAT
TTCCTCGCCA CCGGCGAGCT CCTGCCGCCG CCGCTGGTGA GCGAGATCCA CCAGGTGTGC
CGCGAGCACC TCGCCGACCT CTACGCCTTC TACGGCGACG ACCGCGGCGT CAAGATCGCG
CGCAAGCACA TCTCCTGGTA CACCAAGGGC CTGGTGGGCT CGGCGGCCTT CCGCCGCGCG
ATGAACCAGA TCCCCGACAT TCCCGCCCAG CTCGCCGCGG TGGACGACTT CTTCGGCCAG
CTCGCCGAGG CCGGCGCCCG CCTGAGCTAC GAGCACGAGC GCGCGCCGCA CGCCGAATAT
CCGCAGGAAC TCGCAGCATG A
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| Protein sequence | MQFAGFTLRN NLFVAPMAGV TDRPFRQLCK KLGAGVAVSE MVTSNSLLYG SEKTRRRADH
TGEVDPISVQ IAGADPAMMA EAAKFNADNG AQIIDINMGC PAKKVCNVMA GSALMQDEPL
VARILEAVVK AVPDTPVTLK FRTGWNRANK NAPTIARIAE ESGIRAIAIH GRTRADQYMG
EAEYDTIAHV KTLVNIPVIA NGDIGSPQKA KHVLDYTGAD GVMIGRAAQG RPWIFREIEH
FLATGELLPP PLVSEIHQVC REHLADLYAF YGDDRGVKIA RKHISWYTKG LVGSAAFRRA
MNQIPDIPAQ LAAVDDFFGQ LAEAGARLSY EHERAPHAEY PQELAA
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