Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1404 |
Symbol | |
ID | 7084525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1563688 |
End bp | 1564443 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643698421 |
Product | cytochrome c1 |
Protein accession | YP_002355059 |
Protein GI | 217969825 |
COG category | [C] Energy production and conversion |
COG ID | [COG2857] Cytochrome c1 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACGC GAGTGATCAA CTTCATCAAG CGGTTCGCGG CCGTGGCGCT GTTCGCGCCG GCCGTGGCGA TGGCCGCCGG TGCCAGCGTG CATCTGGACA AGGCGCCGGT GAGCAGCGAG CCGGCCGCGC TGCAGCACGG CGCCAAGCTG TTCGTCAATT ACTGCATGAA CTGCCATAGC GCCAGCTTCG TGCGCTACAA CCAGCTGCAG AACATCGGCC TCTCCGAGGC GGAGATCCGC GACAACCTAA TGTTCACCGG CGAGCGCGTC GGCGACCTGA TGAAGATCGC GATGCGGCCG GCGGAGTCCA AGGGGTGGTT CGGCGTCGCG CCGCCCGACC TGACGCTGGT GGCGCGGCAG CGCGCCTCGG CGGACGGCAG CGGGGCCGAC TGGCTGTATA CCTATCTGCG CCAGTTCTAC CGCGACCCGA GCCGCCCGAC CGGCTGGAAC AATGCCATCT TCGCCAACGT GGCCATGCCG CACGTGTTCT GGCAGCTGCA GGGCGAGCAG GTCGCCAAGA TCACGCAGAA TGCGGACGGC ACGACGACGA CGGCCCTCGA ACTCGTCAAG CCGGGCAAGC TGTCGGTCCA GGAGTACGAC AAGGCGGTCG CCGACCTCGT CTCCTTCCTG GTCTGGATGG GCGAGCCGGT GGCCGAGAAG CGCAAGTCGA TCGGCGCCCT CGTGCTGATC TTCCTCGCCG GCATGTTCGT GCTCAGCTAC GCGCTGAAGA AGAACTACTG GAAGGACATT CATTGA
|
Protein sequence | MKTRVINFIK RFAAVALFAP AVAMAAGASV HLDKAPVSSE PAALQHGAKL FVNYCMNCHS ASFVRYNQLQ NIGLSEAEIR DNLMFTGERV GDLMKIAMRP AESKGWFGVA PPDLTLVARQ RASADGSGAD WLYTYLRQFY RDPSRPTGWN NAIFANVAMP HVFWQLQGEQ VAKITQNADG TTTTALELVK PGKLSVQEYD KAVADLVSFL VWMGEPVAEK RKSIGALVLI FLAGMFVLSY ALKKNYWKDI H
|
| |