Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1377 |
Symbol | |
ID | 7084498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1531640 |
End bp | 1532854 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643698394 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_002355032 |
Protein GI | 217969798 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGATGA AGAAACTCAC CACCCTGGCC TGCGCGGCCG CCTTCGCCAT GCTGTCGGGC GCGGCGAGTG CGCAGATTTC GGGCAACACG GTCAAGATCG GCGTGCTCAC CGACATGTCG GGCACCTATT CCGACCTTGC CGGCGCAGGC GCGGTGCTCG CCACCCAGAT GGCGATCGAG GACTTCATCG CCGAGGCCAA ACCGGCCTTC AAGGTCGAGA TGGTCTCCGC CGACCACCAG AACAAGGCCG ACATCGCTTC CAACAAGGCG CGCGAATGGT TCGAGCGCGA GGGCGTCGAC ACGGCTACCG AGCTCGTCAC CACCTCGACC GCGCTCGCGG TGATGAAGAT CGCCAAGGAG ATGAACCGCG TCGCGCTGAT GAGCGGCCCG GCCTCGACGC CGATCACCAA CGAGCAGTGC AACGACGTGA CGGTGCACTA CACCTACGAC ACCTATGCGC TCGCCAACGG CACCGCCAAG GCGGTGACGC AGCAAGGCGG CAACACCTGG TTCTTCCTGA CCGCCGACTA TGCCTTCGGT CAGGCGCTGG AGAAGGATTC GTCCGCGGTG GTGACGGCCA ACGGCGGCAA GGTGCTCGGC TCGGTACGCC ATCCCTTCCC GGCGTCCGAC TTCTCGTCCT TCCTGCTTCA GGCCCAGGCC TCGGGCGCCA AGATCATCGG TCTGGCCAAC GCCGGCGCCG ACACCACCAA CGCGATCAAG CAGGCGGCCG AGTTCGGCGT CACGCCCAAG CAGTCGCTCG CCGGCCTGCT GATGTTCATC TCCGACGTGC ACTCGCTCGG CCTGCAGGCC ACCCAGGGCA TGTACCTGAC CACCGGCTTC TACTGGGATC TCGACGACCA GACCCGCGCC TGGTCCAAGC GCTTCTTCGA GAAGCAGAAG CGCATGCCGA CCATGGTGCA GGCCGGCCAG TACTCCTCGG TGCTGCACTA CCTGCGCGCG GTGCAGGCCA CCGGCACGGA CGAGGCGGGC AAGGTCATGG CGCAGATGAA GGCCACCCCG ATCAAGGACT TCTTCGGCAA GAACGGCCGC ATCCGCGAGG ATGGGCGCAT GGTGCACGAC ATGTACCTGG CGCAGGTGAA GACGCCCGCC GAGTCGAAGT ACCCGTGGGA CTACTACCAC ATCCGCCAGA CCATCCCGGC GGAAGAGGCC TTCCAGCCGC TGGCGCAGTC GAAGTGCCCG CTGGTCAAGA AGTGA
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Protein sequence | MQMKKLTTLA CAAAFAMLSG AASAQISGNT VKIGVLTDMS GTYSDLAGAG AVLATQMAIE DFIAEAKPAF KVEMVSADHQ NKADIASNKA REWFEREGVD TATELVTTST ALAVMKIAKE MNRVALMSGP ASTPITNEQC NDVTVHYTYD TYALANGTAK AVTQQGGNTW FFLTADYAFG QALEKDSSAV VTANGGKVLG SVRHPFPASD FSSFLLQAQA SGAKIIGLAN AGADTTNAIK QAAEFGVTPK QSLAGLLMFI SDVHSLGLQA TQGMYLTTGF YWDLDDQTRA WSKRFFEKQK RMPTMVQAGQ YSSVLHYLRA VQATGTDEAG KVMAQMKATP IKDFFGKNGR IREDGRMVHD MYLAQVKTPA ESKYPWDYYH IRQTIPAEEA FQPLAQSKCP LVKK
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