| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1360 |
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| Symbol | |
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| ID | 7084481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1510041 |
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| End bp | 1512914 |
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| Gene Length | 2874 bp |
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| Protein Length | 957 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643698377 |
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| Product | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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| Protein accession | YP_002355015 |
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| Protein GI | 217969781 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.202167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA CCACCAGCGC GTCCACCCAG AACACCGTCA AAGCCTCCGC CGCCAACCTG
CCGATGCAGG AAATCTCCGG CGAGGTGCTC GTCGAGAAGT ACGCCAAGGG CGATGAACAG
ACCGTCGCCG AAGTGCGTCG CCGCGTCGCG CGCGCGCTGG CTGCAGTCGA AGCCGAGGAC
AAGCGCGCCC ACTGGGAGGC GAAGTTCCTC GAGGCGCAGG AGAAAGGCTT CGTGCCCGCC
GGTCGCATCA ACAGCGCCGC CGGCACCACG CTCGCCGCCA CGCTGATCAA CTGCTTCGTG
CAACCGGTCG GCGACTCGGT CACCGAGGCG GTCGATGGCC GCCCCGGCAT CTACACCGCG
CTCGCCCAGG CCGCCGAGAC CATGCGCCGC GGTGGCGGTG TCGGCTACGA CTTCTCGTCC
ATCCGTCCCA AGGGCGCGCT GGTCAAGGGC ACGGCCTCCA ACGCCTCCGG CCCGGTGTCC
TACATGCGCG TGTTCGACCG CTCGTGCGAG ACGGTGGAGT CCGCCGGCGC GCGCCGCGGC
GCGCAGATGG GCGTGCTGCG CTGCGACCAC CCCGACATCG AGGAATTCAT CCACGCCAAG
GATGAAGGCG ATCTCACCAA CTTCAACATC TCGGTCGGCG TCACCGATCC CTTCATGCAG
GCGGTCGAGG CCGACGGCGA CGTAGAGCTG GTGCACAAGG CCGAGCCCAC CGAAGAGGTG
AAGGCCGCCG GCGCCTACCA GCGCGACGAC GGCATGTGGG TGTACCGCAA GGTGCGCGCG
CGCGAGCTGT GGGACCAGGT CATGCGCTCG ACCTACGACC ACGCCGAGCC GGGCATCCTG
TTCCTCGACC GCATGAACGC GGACAACAAC CTGTACTACT GCGAGACCAT CGAGGCCACC
AACCCCTGCG CCGAACAGCC GCTGCCGCCC TACGGCTGCT GCTGCCTGGG CTCGATCAAC
CTCACGCTCT TCGTCAAGAA CCCCTTCGGC GACAAGGCCG AGTTCGACTA TGCCGGCTTC
GGCAAGGTGG TCGACGTCTC CATCCGCATG CTCGACAACG TGCTCGAGGT CACCCACTGG
CCGCTCGCGC AGCAGCACGC CGAGGCGCAG TCCAAGCGCC GCGTGGGCCT CGGATTCACC
GGCCTGGGCG ACGCGCTGAT CATGCTCGGC CAGCGCTACG ACACCGCCGA GGCGCGCGAG
GAAGCGCGCA AGATCTCCGA GTTCATGCGC AACCGCGCCT ACCTGGCCTC GTCCGAGCTC
GCCCGCGAGC GCGGCGCCTT CCCGCTCTTC AACGCCGACC TCTACCTGTC GGGCGGCAAC
TTCGCCTCGC GCCTGCCGGC CGATGTGAAG GACAAGATCC GCAAGCACGG CATCCGCAAC
TCGCACCTGC TGTCGATCGC CCCCACCGGC ACGATCAGCC TGGCCTTCGC CGACAACGCC
TCCAATGGCA TCGAGCCGCC CTTCTCCTAT ACGTACACCC GGCGCAAGCG CATGGCCGAC
GGCACCTTCA AGGAGTACGC GGTCGAGGAC TACGCCTGGC GTCTGTACAA GCACCTCGGC
GGCAACGTCG ACAAGCTGCC GCAGTCCTTC GTCACCGCGC TGGAGATCTC CGCGCAGGCC
CACAAGGACA TGGTCGCCGC GGTCGCGCCC TACGTCGACA CGTCCATCTC CAAGACGGTG
AACGTGCCCG AGGACTACCC CTACGCCGAG TTCGAGGATC TTTACCTCAC CGCCTGGAAA
GCCGGCCTCA AGGGGCTCGC CACCTACCGT CCCAACTCGG TGCTGGGTTC GGTGCTGTCG
GTCACCCCGA CCGCCGAGCA GAAGCAGCCG CACGACGTCG AGATCGCCGA CGCCAACAAG
CGCCTGTCGA TCAAGAACCT GCCCGCTCCG GTGCTGTCCA GCCTGCGCTG GCCCGGCCGC
CCGGACCTGC CCGACGGCAA CCTGGCGTGG ACCTACATGC TCAACACCCC GACCGGCGGC
TTCGCGCTCT TCGTCGGCCA GGTGGGCAAC AACGGCGGCA GCTTCCCGTT CGAGGTGTGG
GTCAATGGCG CCGACCAGCC GCGCGGCCTG GGTGCGGTGG CCAAGACCCT GTCGATGGAC
ATGCGCGCCA ACGACCGCGG CTGGCTCAAG CTCAAGCTCG ACACCCTGGC CCGCACCGTG
GGCGAGCGCT CCTTCGAGAT GCCCTTCCCG CCGCACGGCG AGAAGAAGCT GGTGCCCGGC
GTGGTGTCGG CCTTCGCCCA GGTGGTGAAC TACCGCTGCG AGAAGCTCGG CGTGTTCGAC
AAGGAAGACG AGAGCAACGG CGTCCTCGAC ACGCTGTTCA GCCTGGAAGA ACCCAAGACC
GGCACCGACG GCACGCTGTC GTGGACGGTG GACATCTACA ACCCGGCCAC CGGCGAAGAC
TTCGTGCTCG GCCTCAAGGA AATCACCCTG CCGGACGGCG TCACCCGCCC GTACTCGGTG
TGGCTGTCGG GCAATTATCC GCGCGCGCTG GACGGCCTGA CCCGCATCCT GTCGCTCGAC
ATGCGCGTCA TGGACCCGGC CTGGATCGGC ATGAAGCTGC GCAAGCTCCT CGACTACCCC
GAGCCGCTCG GCGACTTCAT GGCCTTCGTG CCCGGCACCC GCCGCCAGCA GAACTGGCCC
AGCACCGTGG CTTACCTGGC GCAGCTCATC ATCCACCGCT ACGCCATGCT CGGCGTGCTC
GACGAGCGCG GCTACCCGAC GCGCGAGATG GGCATCCTGG AGTCGCCGCG CGACGACAAC
GAGCCCAAGC TGATGCAGGG CGCGCTGTGC AACGAATGCG GCAACCACAC CGTGATCCGC
AAGGACGGCT GCGACTTCTG CACCGCCTGC GGCGCGGTCG GGACCTGCGG CTGA
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| Protein sequence | MSETTSASTQ NTVKASAANL PMQEISGEVL VEKYAKGDEQ TVAEVRRRVA RALAAVEAED
KRAHWEAKFL EAQEKGFVPA GRINSAAGTT LAATLINCFV QPVGDSVTEA VDGRPGIYTA
LAQAAETMRR GGGVGYDFSS IRPKGALVKG TASNASGPVS YMRVFDRSCE TVESAGARRG
AQMGVLRCDH PDIEEFIHAK DEGDLTNFNI SVGVTDPFMQ AVEADGDVEL VHKAEPTEEV
KAAGAYQRDD GMWVYRKVRA RELWDQVMRS TYDHAEPGIL FLDRMNADNN LYYCETIEAT
NPCAEQPLPP YGCCCLGSIN LTLFVKNPFG DKAEFDYAGF GKVVDVSIRM LDNVLEVTHW
PLAQQHAEAQ SKRRVGLGFT GLGDALIMLG QRYDTAEARE EARKISEFMR NRAYLASSEL
ARERGAFPLF NADLYLSGGN FASRLPADVK DKIRKHGIRN SHLLSIAPTG TISLAFADNA
SNGIEPPFSY TYTRRKRMAD GTFKEYAVED YAWRLYKHLG GNVDKLPQSF VTALEISAQA
HKDMVAAVAP YVDTSISKTV NVPEDYPYAE FEDLYLTAWK AGLKGLATYR PNSVLGSVLS
VTPTAEQKQP HDVEIADANK RLSIKNLPAP VLSSLRWPGR PDLPDGNLAW TYMLNTPTGG
FALFVGQVGN NGGSFPFEVW VNGADQPRGL GAVAKTLSMD MRANDRGWLK LKLDTLARTV
GERSFEMPFP PHGEKKLVPG VVSAFAQVVN YRCEKLGVFD KEDESNGVLD TLFSLEEPKT
GTDGTLSWTV DIYNPATGED FVLGLKEITL PDGVTRPYSV WLSGNYPRAL DGLTRILSLD
MRVMDPAWIG MKLRKLLDYP EPLGDFMAFV PGTRRQQNWP STVAYLAQLI IHRYAMLGVL
DERGYPTREM GILESPRDDN EPKLMQGALC NECGNHTVIR KDGCDFCTAC GAVGTCG
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