| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1354 |
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| Symbol | |
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| ID | 7084475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1502685 |
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| End bp | 1505000 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698371 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002355009 |
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| Protein GI | 217969775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTCG ACCTGCTCCA GGCCACCGCC CTGCTGCTCG CCCTCTGCCT GCTGCAGGGC
GGTTTGGCAC GCCGCTGCGC GCACGGCGGC CCGGCATTCG CGGTCGGGTC CGGGCTGATC
TACGGGCTGG CCTGCATCGC CGGCATGATG ATGCCGATCA CGCTGGCGCC CGGCGTCATC
GTGGATCCGC GCTCGGTGGT GCTGAGCGTG GGCGCACTCT TCGGCGGTCC GCTCGCCGGC
GCCGTGGCCG GCCTGGCCGC CGCAGCCTAT CGCATCTGGC TGGGCGGCAG CGGCGTCTTC
ATCGGCGTGA CGACGATCAC GCTGGCGGTG CTGCTCGGCC TCGCCTTCCG CCTCGGCGCC
GCGCGCGGCT GGCTGCGGCC GGCGCCGCTG CAGCTCTTCC TCTTCGGCGT ATTCACCCAC
GCCACCAGCC TGCTGCTGAT CGCAACGGTC CCCAACCAGT CCCTCGCCGG TCTCTTCGCC
AACCTCGGCC TGCCCTACCT GCTGCTGATG GGGGCCGCCA CGCTGCTGCT CGGCGCCTTG
CTGCGCGACC TCGAGCAGCG CCGCGCGACC GAACGCGCGC TGGCGGCGAG CGAGGCGCGC
CTGCGCGCGA TCACCGCGGC CATCCCCGAC CTGGTCTTCG TGGTCGACGA GGACGGCCGC
TACCTCGAGG TCATCACCCG CCAGGAAAAC CTGCTCGCCG CACCGCCCGA GCAGGTGATC
GGTCGACGCT CCGAGGACGT GCTGCCCGCG GGACCGGCCG CCGTGCTGCG CGAGGCGCTG
GAGCAAGCCC TGACCAGCCC GGAGCGGACC TGCGCCCGCT ATGCGCTCGA CACGCCCGCC
GGCCACCGCG AATTCCAGGC CTGGATCCAG GCCATCGACG CCCCGATCGG CGGGCGCCGC
GCGGCGGCCA TCCTGGTGCA GGACATCACG CCCAACGTGG CCGCCGAGGA GCGCATCCGC
AAGCTCGCCT ACTACGACCC GCTCACCACG CTGCCCAACC GCCGCCTGCT CGTCGAGCGC
CTCGGCCACG CGATCGCCAC CAATGCGCGC ACCGGCCTGC ACGGCGCGCT GATGTTCATC
GACCTGGACG ACTTCAAGGA CATCAACGAC CTGCTCGGCC ACCACAACGG CGACGTGCTG
CTGCGCGAGG CCGGTGCACG CCTGCGCGGC GTGGTGCGCG AATCCGACAC GGTGGCACGC
TTCGGCGGCG ACGAGTTCGT GGTCCTGCTC GAGCTGCTCG CCGAATCTGC CGACGAGGCC
TTGCTCGCCG CGCGTCAGGT CGCGGACAAA CTGCTCGAAC AGCTCGGCCA TCCCTACCGT
CTCGACGGAC TCGACCGCAA ATGCACCGCG AGCCTGGGCC TGGTGATCTT CAACGGCCAC
GAGCACACGG CCGACGAACT GATGCAGCGC GCCGACCTGT CGATGTACGA GGCCAAGCGC
TCGGGCAAGA ACACCGCCCG CGTCTTCGAT CCGCACATGC GTACCGAGCT GGCCGACCGG
CTCGCGCTGG AGACCGAGCT GCGCGGCGCG ATCGGCTCCG GCGCATTCCT GCTCCACCTG
CAGCCCCAGC TCGACGCCGG CGGACGCCTG ATCGGCGCCG AGGCCCTGCT GCGCTGGAAC
CGCGAGGGGC ACGGACCGAC CCCGCCCGCC CTGTTCATCC CGATCGCCGA GCAGGCGGGC
CTGATGCCTG CGCTCGGACG CGAGGCGATG GCGCTCGCCT GCGAGGAACT CGCACGCTGG
GTCGCGCTCC CCGGCGCCGA CGGCCTGGTG ATGGCGGTCA ACGTCAGCGC CGCCCAGCTC
TACGAGCCCG GTTTCGTCGA GGAGGTGCTC GCGCTGCTGG CGCGCACCGG CGCCCCCGCC
GAGCGGCTCA AGCTCGAGCT CACAGAATCG CTGCTGCTCA CCGACATCGA GCGCGCCATC
GAGGCCATGA CCCGCCTGCG CGAGATGGGC ATACGCTTCT CGATCGACGA CTTCGGCACC
GGCTACTCCT CGCTCGGCTA CCTGCAGCGC CTGCCGCTCG ACGAGCTCAA GATCGACCGC
ACCTTCGTGC GCGACCTGCC CGCCAACGCC AGCAGCCTGG CGATCGTGCG CACCATCATG
GCACTCGCCG ACACCCTGCG CATCCGCGTC GTCGCCGAGG GCGTGGAAAC CTCCGCACAG
CACGCCTGTC TGCTCGACAA CGGCTGCGAC GCCTTCCAAG GCTTCCTGTT CGCCCGCCCC
GAGGCGGTGG AAAGCTTCCG CGCACGGATG TCCGCGACGG ACGCCTTGCA CGGGAGCGGC
ACGCAGCCCC GGGGCGGGGC AGATCGCGAC CGATGA
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| Protein sequence | MILDLLQATA LLLALCLLQG GLARRCAHGG PAFAVGSGLI YGLACIAGMM MPITLAPGVI
VDPRSVVLSV GALFGGPLAG AVAGLAAAAY RIWLGGSGVF IGVTTITLAV LLGLAFRLGA
ARGWLRPAPL QLFLFGVFTH ATSLLLIATV PNQSLAGLFA NLGLPYLLLM GAATLLLGAL
LRDLEQRRAT ERALAASEAR LRAITAAIPD LVFVVDEDGR YLEVITRQEN LLAAPPEQVI
GRRSEDVLPA GPAAVLREAL EQALTSPERT CARYALDTPA GHREFQAWIQ AIDAPIGGRR
AAAILVQDIT PNVAAEERIR KLAYYDPLTT LPNRRLLVER LGHAIATNAR TGLHGALMFI
DLDDFKDIND LLGHHNGDVL LREAGARLRG VVRESDTVAR FGGDEFVVLL ELLAESADEA
LLAARQVADK LLEQLGHPYR LDGLDRKCTA SLGLVIFNGH EHTADELMQR ADLSMYEAKR
SGKNTARVFD PHMRTELADR LALETELRGA IGSGAFLLHL QPQLDAGGRL IGAEALLRWN
REGHGPTPPA LFIPIAEQAG LMPALGREAM ALACEELARW VALPGADGLV MAVNVSAAQL
YEPGFVEEVL ALLARTGAPA ERLKLELTES LLLTDIERAI EAMTRLREMG IRFSIDDFGT
GYSSLGYLQR LPLDELKIDR TFVRDLPANA SSLAIVRTIM ALADTLRIRV VAEGVETSAQ
HACLLDNGCD AFQGFLFARP EAVESFRARM SATDALHGSG TQPRGGADRD R
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