| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1344 |
|---|
| Symbol | |
|---|
| ID | 7084465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1490491 |
|---|
| End bp | 1491063 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643698361 |
|---|
| Product | OHCU decarboxylase |
|---|
| Protein accession | YP_002354999 |
|---|
| Protein GI | 217969765 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3195] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03164] OHCU decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.207628 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCGCCACCGC CCCAACCACC GCCCCCGACC GCCCGGCCGC CGCGCTGGAC
GCCGCCCTGG ATGAACTCTC CCGCCTGGCG CAGGACGCCT TCGTCGCCCG CCTCGAAGGC
ATCTTCGAGC ACTCGCCGTG GATCGCCGAG CGTGCCTGGA GCGCCGGTCC CTTCGCCAGC
ATCGACGCGC TGCACGCCGC GATGTGCCTG GTGGTCGACA CCGCCGACCC TGCCGAGCAG
CTCGGCCTCA TCTGCGCCCA CCCCGAGCTC GCCGGCAAGG AGGCCGAGGA AGGCACGCTG
ACCACCGCCT CCACCGGCGA GCAGCGCGGC GCCGGGCTCG ACCAGTGCAG CAAGGAAGAG
CTCCAGCGCC TGCGCCGGCT CAACCAGGAC TACCGCGCGC GCTTCGGCTT TCCCTTCGTG
GTCGCGGTCA AGGGCCTCAC CCGCCACCAG ATCCTGGACC GCGTCGAGGC CCGCCTGGCC
AACGTGCGCG ACGCCGAATT CCGCACCTGC CTGGCCGAGA TCGGCAAGAT CGCCCGCTTC
CGGCTGGATG CGATGTTCGG GACGAACAGC TGA
|
|---|
| Protein sequence | MSTPATAPTT APDRPAAALD AALDELSRLA QDAFVARLEG IFEHSPWIAE RAWSAGPFAS
IDALHAAMCL VVDTADPAEQ LGLICAHPEL AGKEAEEGTL TTASTGEQRG AGLDQCSKEE
LQRLRRLNQD YRARFGFPFV VAVKGLTRHQ ILDRVEARLA NVRDAEFRTC LAEIGKIARF
RLDAMFGTNS
|
|---|
| |