Gene Tmz1t_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1340 
Symbol 
ID7084461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1485489 
End bp1486889 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content70% 
IMG OID643698357 
Productxanthine permease 
Protein accessionYP_002354995 
Protein GI217969761 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000141627 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATC AAACCCGCAC GAGCCGGCCG CTCGAACTCG ACCCGGTAGA CCAGTGCCCG 
CCCGGCGGGC GCCTGTTCAC CCTCGCCCTG CAGCACGTGC TGGTGATGTA CGCCGGCGCG
ATCGCGGTAC CGCTGATCGT CGGCGGCGCG CTCAAGCTGC CCAAGGACCA GATCGCCTTT
CTCATCAACG CCCACCTGCT GTGTTGCGGC CTGGTCACCA TCATCCAGGC GCTCGGAGTC
GGCCGCTTCG GCATCCGCCT GCCGATCATG ATGGGCGTCA CCTTCGCCGC GGTCGGGCCG
ATGGTGGCGA TGGCGGGCAA CCCCGCGCTC GGCATCAACG CCATCCTCGG CGCGGGCATC
GCCGCCGGCC TCTTCGGCAT CCTGTTCGCG CCCCTGGTGG CGCGCGCGCT GCCGCTGTTC
CCGCCCGTGG TCACCGGCTC GATCATCGCG GTGATCGGCC TCTCGCTGAT GCCGGTGGCG
ATCAACTGGT CGGCCGGCGG CCAGCCGCGC ATCCGCGACG CGGCGACCGG ACTGATGGTG
GACAACCCCG CCTACGGTGC CCCGGAATAC CTCGCCATCG CCGCCATCGT GCTGGTCGTG
GTGCTGGCGA TCACCCGCTA CGGTCGTGGC TTCCTGTCCA ACGTGGCGGT GCTGGTCGGC
ATGGGCGTGG GCTTCGCGAT CGCGATCGCG CTCGGCAAGG TCGGCTTCGA CGGCCTCGCC
GACGCGCCCT GGGTGTCGAT CGTGACGCCG CTGCACTTCG GCGCGCCGAT CTTCGACCCG
ATCTCGATCG CCACCATGTG CCTGGTGATG GTGGTCGTGA TGGTCGAGTC GCTCGGCATG
TTCCTCGCGC TCGGCGAGCT CACCGGCCGC CGGCTGTCGC GCGACGACCT CACCCGCGGC
CTGCGCACCG ACGGCCTCGG CACCCTGATC GGCGGCTTCC TGAACACCTT CCCGCACACC
AGCTTCTCGC AGAACGTCGG CCTGGTCGGC GTCACCGGCG TCAAGAGCCG CTGGGTGTGC
GTGGCGGGCG GCGCGATCCT GATGGCCTTC GGCCTCTTCC CCAAGATGGC GCTGATCATC
GCCTCGGTGC CGCAGTACGT ACTCGGCGGC GCCGGCCTGG TGATGTTCGG CATGGTCGCC
GCCACCGGCA TCAAGATCCT GCTCGCGGCC GACCTGCGCA ACAACCGCTT CAACCTCTAC
ATCGTCGCGC TGTCGGTGGG CGCCGGCATG ATCCCGATGG TGGCGCCGAA GTTCTTCCAG
CAGATGCCGC ACGCGCTCGA ACCCCTGCTG CACAGCGGCA TCCTGCTCGC GGCGATCACC
GCGGTGACGC TCAACCTCTT CCTCAACGGC GGCCGCCGCA GCGCCAGCGC CGAGGCGATC
GAGCCGGCGC TGGCGCACTG A
 
Protein sequence
MSDQTRTSRP LELDPVDQCP PGGRLFTLAL QHVLVMYAGA IAVPLIVGGA LKLPKDQIAF 
LINAHLLCCG LVTIIQALGV GRFGIRLPIM MGVTFAAVGP MVAMAGNPAL GINAILGAGI
AAGLFGILFA PLVARALPLF PPVVTGSIIA VIGLSLMPVA INWSAGGQPR IRDAATGLMV
DNPAYGAPEY LAIAAIVLVV VLAITRYGRG FLSNVAVLVG MGVGFAIAIA LGKVGFDGLA
DAPWVSIVTP LHFGAPIFDP ISIATMCLVM VVVMVESLGM FLALGELTGR RLSRDDLTRG
LRTDGLGTLI GGFLNTFPHT SFSQNVGLVG VTGVKSRWVC VAGGAILMAF GLFPKMALII
ASVPQYVLGG AGLVMFGMVA ATGIKILLAA DLRNNRFNLY IVALSVGAGM IPMVAPKFFQ
QMPHALEPLL HSGILLAAIT AVTLNLFLNG GRRSASAEAI EPALAH