| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1339 |
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| Symbol | |
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| ID | 7084460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1483931 |
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| End bp | 1485436 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643698356 |
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| Product | xanthine dehydrogenase, small subunit |
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| Protein accession | YP_002354994 |
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| Protein GI | 217969760 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A |
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| TIGRFAM ID | [TIGR02963] xanthine dehydrogenase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00017372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGCC AGACGATACG CATCCTGCTC GACGGCGAGG CGGTGTCGAT CACCGACCTC
GCCCCCACCA CCAGCCTGCT CGCCTGGCTG CGCGGCGCGC GCGGCCTCGT CGGCACCAAG
GAAGGCTGCA ACGAGGGCGA CTGCGGCGCC TGCACCGTGG TGGTGGGCGA GCTCGCCGAC
GACCCCGCGG ACGCGCCGCG CCTGTACGCG GTCAACGCCT GCATCCGCTT CCTGGCCACG
CTCGACGGCA AGGCGGTGTT CACCGTCGAA CACCTGCGCA GCCTCGCCGG TGGCGCCCTG
CACCCGGTGC AGCAGGCGAT GGTCGATTGC CACGGCTCGC AATGCGGCTT CTGCACCCCC
GGCTTCACGA TGTCGCTGTG GGCGCTGTAC GAGGACCGTC ACGCGCAGGG CGAGGCCGCC
GCGGATCCCG CCCGCATCCG CAGCGCGCTC GCCGGCAACC TGTGCCGCTG CACGGGCTAT
CGGCCGATCG TGGAGGCCGG CGAGCGCATG TTCGACGCCC CGTCGCGCCT GCTCGACCGC
GATCGCCTGC GCACCGCCCT GCTCGCGCTG CGCCGCGACG ACACGCTCGA TTTCGGCCAC
GAGGGCGGCC GCTTCGTCGC CCCGCGCAGC GTGGACGAAC TCCTCGCCCT GCGCAGCCGC
CACCCCGCGG CCACCCTGCT CGCCGGCGGC ACCGACATCG GCCTGTGGGT CAACAAGGGC
CTGCGCCGGC TCGACACCCT GATCCACACC GGCGAGGTCG CCGCCCTGCG CGCGATCGTG
CCGCACGCCG GCGGCCTGCG CATCGGCGCA GCGGCTTCGC TCACGGCCGC CTTCGCCGCG
CTCGTCCGCC TGCACCCGGA GCTGGCCGAG CTGCGGGAGC GCTTCGCCTC GCCGCCGGTG
CGCAACGCCG GCACGCTCGG CGGCAACGTC GCCAACGGCT CGCCGATCGG CGACTCGATG
CCCGCGCTGA TCGCGCTCGG CGCGCGCGTG GTGCTCGCGA GCGTGCGCGG CCGGCGCAGC
CTGGCGCTGG AGGACTTCTA TCTCGACTAC ATGAAGAAGG ACCTCGCCGC CGACGAGATC
GTCGAGGCGA TCGAACTGCC GCCGCCCGCA CCCGCGCGAC GCTTGCGCAG CTGGAAGCTG
GCCAAGCGCT TCGACTCCGA CATCTCCGCG GTATGCGCCG GCTTCGCGCT CGAGCTGCGC
GCGGGCCGGA TCCACGCTCC GCGCATCGCC TTCGGCGGCA TGGCGGCGAC GCCCAGGCGC
GCCACCGCCA CCGAGGCCGC GCTCGCCGGC CGGCCCTGGG ACGAAGCCGC GCTCGCCGCC
GCACAGTGCG CGCTCGAACA CGACTTCGCC CCGCTCGACG ACCTGCGCGC GAGCGCCGGC
TACCGCCGCC GCGCCGCCGC CGGCCTGCTC GCGCGCTTCT TCCTCGAGAC CCGCCCCGAC
GCGCCGCTCG CCGCGGCGCA GACGCGCGCC TTCGCCGCGG AAGATCTCGC CGGCGGCGGG
CGCTGA
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| Protein sequence | MDSQTIRILL DGEAVSITDL APTTSLLAWL RGARGLVGTK EGCNEGDCGA CTVVVGELAD
DPADAPRLYA VNACIRFLAT LDGKAVFTVE HLRSLAGGAL HPVQQAMVDC HGSQCGFCTP
GFTMSLWALY EDRHAQGEAA ADPARIRSAL AGNLCRCTGY RPIVEAGERM FDAPSRLLDR
DRLRTALLAL RRDDTLDFGH EGGRFVAPRS VDELLALRSR HPAATLLAGG TDIGLWVNKG
LRRLDTLIHT GEVAALRAIV PHAGGLRIGA AASLTAAFAA LVRLHPELAE LRERFASPPV
RNAGTLGGNV ANGSPIGDSM PALIALGARV VLASVRGRRS LALEDFYLDY MKKDLAADEI
VEAIELPPPA PARRLRSWKL AKRFDSDISA VCAGFALELR AGRIHAPRIA FGGMAATPRR
ATATEAALAG RPWDEAALAA AQCALEHDFA PLDDLRASAG YRRRAAAGLL ARFFLETRPD
APLAAAQTRA FAAEDLAGGG R
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