Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1329 |
Symbol | |
ID | 7084450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1468101 |
End bp | 1469798 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643698346 |
Product | diguanylate cyclase |
Protein accession | YP_002354984 |
Protein GI | 217969750 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGATTCG GCATCGCCGC CCGTCTTGGC ATCGTACTCG CCCTGTCCGG CATGCTCTCC GCCGGCATCA CCGCCTTCCA GGCCCAGCGC GCCAGCGAGA CCGTGCTGGT GGACAGCGCG CGTGCCGAGC TGCTCACCTC CACCCGGGTG CTCGCGCAGC GCATCACGCA GGTGCGCGAG GACATCTCGC GCACCCTGCT CGCGCTCGCC CGCCACCCGG CCGCGCTCGC GGCGCTGGAG AGCGACGACC CGCAGGCTGC GACGCAGCTC GCGACCCTGC TCGCCCTGCC GATGGCGGCC AACCGCGCCT ACTTCCAGCT CCGCCTGATC GGCGCCGCCG ACCACGGCCT CGAGCGCGTG CGGATCGACC GCGACGGCGA CGCACTGCTG CGCGTGGACG GCGACGCGCT GCAGGAAAAG GGCCACTACC CCTACGTCTT CGACGCCCTC GCGCTGGCAG CGGGCGAGGT TTACATGTCG CGCGTGAGCA TCAATCGCGA GCGTGGCTCG CACGCCGCCC TCGGCCGGCC CGCGGTGCAG CTCGCCACCC CGGTCGTCGA CGAATCGGGC CGGCCACGCG GGGTGATCGT GGGCAGCATC GACCTCAACG GCGTGTTCGC CCTGCTCGCC GCCGACCTGC CCGCCGACTT CCTGCTCTAC CTCGCCAACA GCGCGGGCGA CTACCTGATC CACCCCGACC CCGCGCGCAC CTTCGGCTTC GACAAGGGAC GCCGGGTACG GGTGCAGGAC GAGTTCCCCG CCACGCAGGC CGTGATCGAC GGCCGCAGCA GCGAGTCGAT GATCGACAGC GATGCCGGCG AGCACGCGCA GGCGCCGCTG GTCGCCGCCT TCATCGCCGC GCGGGTGCAG CTGCGCACCG AAGAGGGCGC CTTCATCCTC GGCCTCGCGC GCCCACGCGC CGCCGTGCTC GCCGAGCTCG ATCCGCTGCG CGGGATCATG CTGCAGATCG TCATCGGCAT GAGCCTCACC GGCATCCTGC TCGCGGCCAT CCTCGCCCGC GCGATCACCC ATCCGATCGA GGTGCTGGGT GCCGCGGTGC AGAACTTCTA CGACAACGAC CAGGCCCCGG CGCTGCCGGT CGAGCGTCAG GACGAGATCG GCGCCCTCGC CCGCCGCTTC GCCGAGCTGC GCACCCAGAT CGGGCAGCAG TTGGCCGAGC TCGAGCACCG CCGCCGCGAG CTCGAGCATC TCGCCCGCCA CGACGCGCTC ACCGGGCTGC CCAACCGCGC GCTCTTCGAC GACCGCATGG CGGTGGCGCT CGCGTCCGCC CGCCGCGACG ACGGCGGGCT GGCCTTGCTG TTCGTCGATA TCGATGATTT CAAGCCGATC AACGACCGCC TCGGCCACGT CGTCGGCGAC CGCGTGCTCG AAGGCGTGGC GGCGCGCATC CGCCAGAGCA TCCGCGAGTC CGACACCGCG GCGCGCATCG GCGGCGACGA GTTCGTCGTG CTGCTGCCCG GGATCGCGTC GGCCGAAGAC GCCAGAGTGG TCGCGGACAA GATCCGCGCG GCGATCGACC GCCCGTTCAT GATCGACGGT GGAGAGCTCG CGGTTTCGGT GAGCATGGGC CTCGCCCACT ACCCGCAGGA CGGCAGCGAC TCCACCACCC TCGCCCGCCA CGCCGATGCC GCGATGTACC GCGACAAGGC CGAAGGCAAG GCACGGCGGC ACAGCTGA
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Protein sequence | MRFGIAARLG IVLALSGMLS AGITAFQAQR ASETVLVDSA RAELLTSTRV LAQRITQVRE DISRTLLALA RHPAALAALE SDDPQAATQL ATLLALPMAA NRAYFQLRLI GAADHGLERV RIDRDGDALL RVDGDALQEK GHYPYVFDAL ALAAGEVYMS RVSINRERGS HAALGRPAVQ LATPVVDESG RPRGVIVGSI DLNGVFALLA ADLPADFLLY LANSAGDYLI HPDPARTFGF DKGRRVRVQD EFPATQAVID GRSSESMIDS DAGEHAQAPL VAAFIAARVQ LRTEEGAFIL GLARPRAAVL AELDPLRGIM LQIVIGMSLT GILLAAILAR AITHPIEVLG AAVQNFYDND QAPALPVERQ DEIGALARRF AELRTQIGQQ LAELEHRRRE LEHLARHDAL TGLPNRALFD DRMAVALASA RRDDGGLALL FVDIDDFKPI NDRLGHVVGD RVLEGVAARI RQSIRESDTA ARIGGDEFVV LLPGIASAED ARVVADKIRA AIDRPFMIDG GELAVSVSMG LAHYPQDGSD STTLARHADA AMYRDKAEGK ARRHS
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