| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1326 |
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| Symbol | |
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| ID | 7084447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1463459 |
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| End bp | 1466467 |
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| Gene Length | 3009 bp |
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| Protein Length | 1002 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698343 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002354981 |
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| Protein GI | 217969747 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.121951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCC CGCGCGGCGG CGTCTTCGAG CGTCCGCTGG TCCAGGCGGC GGTGGCGGTG
CTGCTGGTGT TCGGGCTGCT CGCCGCCTTC CTGCTGTTCT CCCACCGCTC GGCCGAGACG
ATCACCACCA CCGCCTCGCG CAACGAGGTG CGCGTGCTGG CCACGCAGAT CGAGGGCGCG
CTGCGCCGCA TCGAGATGAG CATCGGGTTC ATGCGCGACA AGTACATCCG CATCGGCCTG
CACGAGAACG CGGGCACCCC CGCGTGGGAG GCCTCGCTGG TGCAGCTGCA GCTGGAGTTG
CAGCATCTGG CGCGCGGCTT TCCGGAAGCC GTCGCCATCC TGGTGACCGA CGCGCAGGGC
AAGATCCTGG CCAGCACCCT CGACACGCCG CCGCAATGGG ACATCGGCGA CCGCGAATAT
TTCCGCCACG CCCGCGAACA CCGCCAGGAC GCGCTCGCTT TCTCCGAGCC CGTGATCTAC
AAGGCCGGCC CGCGCGAGGT CGTGGTGGCC TACGAAGCGA TCCGCAACCC GGCGGGCGAT
TTCGTCGGCG TGGTCGCGGT CGCGCTCGAC CTGCAGCGCC TGCAGGACCT GCTGCTCGGG
GTGGACGCCG GTCGCCAGGG CATGGTCAGC ATCCGGCGCA GCGACGACGG CCGCCTGGTG
CTGCGCTTGC CGGACCACGG CGCCAGCCGG GTCGCCGACA TCACCAGCAC CGAGCCTTTC
CTGGCCATCC GCCGCGGCGA GACGTCCGGC AGCGCGCGCT ACGTCGGCAT CGCGGACGAA
GTCGAGCGCA GCTTCGCCTT CCAGGCGCTG CGCGACTACC CCTTCTACGT GGTGATCGGC
CGCGCGATCT CCGAGCAATT CGCGCCCTGG CGGCAGACCG CGACCGTCGC CACGATCATC
GCCTTGGCCA CCCTGGGCCT GCTGCTGGCG CTGCAGGCTG CCCTGCACCG CAGCCGCCGC
CAGCTCGCGC GCAGCAAGCG CAGCTTCGAC GCCCTCATCG ACAGCCGCCG GGAGGCGACC
TGCGCCTGGC GGCCCGATAC CACGCTGCTG ACCTGCAACG AGCGCTACGC CGAACTGCTC
GGCACCGAGG CCGCGTCCCT GCCGGGCACG CGCTGGATCG ACAACGTGCC GGAGGCGAAG
CGCGCGGAGG TCCACGCCGC CATCGCGCGG ATGCTGCAGG GCGCCGGCAC GCTCACCACC
GATCGCCGCC TCCGCCAGGC CGACGGCCGC ACGCGCTGGC TGCGCTGGCT CGACCTGCCG
GTGCTCGACG AGGAGGGGCG CTGCGTCGAA GTGCACTCGA TCGGCCAGGA CATCACCGCG
CAGAAGGAGG TCGAGCTGCG CCTGCGCCAG CTCGCACTGG CCGTGGAGCA GAGCCCGAAC
ACGATCGTGA TCACCGACAC CGATGGTCGC ATCGAGTATG TCAACGAGGC CTTCGTGCGC
ACCACCGGCT ACACCGCCGC AGAGGCGATC GGCCAGAACC CGCGCCTGCT CAACGCCGGC
AAGACCTCCG CCGCCACCTA TGCCGACCTG TGGGCCACGC TCGGCCGCGG CGAGGTGTGG
CGCGGCGAGT TCATCAACAC CCGCAAGGAC GGCGGCACCT ACACCGAGCT CGCCACGATC
GCGCCGATCA AGCAGGCCGA CGGCAGCGTC AGCCACTATG TGGCGATCAA GGAGGACATC
ACCGGGCGCC GCGAGGCCGA GGCGCGCATC CGCCAGCTCG CCTACTACGA CACCCTCACC
GGCCTGCCCA ACCGCAGCCT GATGTGGGAC CGCCTGCGCC ACGCCATCGC GGCGAGCGCG
CGCAGCGGCG CGAGCGGCAT GCTGATGCTG CTCGACATCG ACCACTTCAA GCTGCTCAAC
GACACCCAGG GCCACGAGGT GGGCGATGCC CTGCTGCGCG AGGTGGCGCA GCGCCTGCGC
GGCGCGCTGC GCGAGGAGGA CACGGTGGCG CGGGTGGGCG ACGACGACTT CGCGATCGTG
GTCGAGAACC TGGGCGCGGA CCGCGACGAA GCGATCGGCC GCGCCGAGAA GATCGCCGAG
CACCTGCACC GCTGCGTGAC CGCGCCCTGC GAGCTCGGCC TCGCGAGCGG CCCCTACCAC
GTCGGCGCGA GCCTGGGCCT GACCCTGTTC CGCGGCCGCA ACGCGGCGGC CGACGCGGTG
CTCAAGCAGG CCGAGGTGGC GGTGGCGCGC GCCAAGGACG ACGGCCGCAA CCTGATCCGC
TTCTTCAGCG AGGCGATGCA GGCGGTGGTG GCCGCGCGCG CCGAGCTGGA GCTGAAGCTG
CGCGCGGCGC TGGCCTGCAA CGGCTTCCGC CTGTACTACC AGCCGCAGCT CGACCGCAAC
GGCCGCGTGA TCGGCGCCGA GGCGCTGATC CGCTGCTTCG ACGCCGAGGG CGAGATGATC
TCGCCCGCCG CCTTCATCCC GCTCGCCGAG GAGACCGGCC TCATCGTGCC GATCGGCGAG
TGGGTGCTGG AGACCGCCTG TGCGCAACTG CGTGCATGGC AGCGCACGCC CTCCACGGCC
GGGCTGAGCC TGTCGATCAA CGTCAGCGCG CGCCAGTTCC ACCAGCCCGA CTTCGTCGGC
AAGGTGGCGG CGGCGATCGA GCGCCACCGC ATCCGCCCCG GCGGCCTCGA GATCGAGCTC
ACCGAGAGCG TGGTGATCGG CGACATCGAG ACCACGGTGC TGCGCATGCG CCAGATCAAG
GCCCTGGGGG TGAGGTTCGC ACTCGACGAC TTCGGCACCG GCTATTCCTC GCTGTCCTAT
CTCAAGCGCC TGCCCTTCGA CCAGCTCAAG ATCGACCAGA TGTTCGTGCG CGACATGGAG
AAGGACACCA GCAGCGAGGC GATCGTGCGC GCGATCCTCG CGCTCAGCCG CTCGCTCGAC
CTGAAGGTGG TGGCCGAGGG TGTCGAGACC GCCGCCCAGC ACGAGCTGCT GCTGACGCGC
GGCTGCGAGC TGTTCCAGGG CTATCTGTTC GGCCGGCCGG TTCCGATCGA GGACTGGAAG
GCAGGCTGA
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| Protein sequence | MSAPRGGVFE RPLVQAAVAV LLVFGLLAAF LLFSHRSAET ITTTASRNEV RVLATQIEGA
LRRIEMSIGF MRDKYIRIGL HENAGTPAWE ASLVQLQLEL QHLARGFPEA VAILVTDAQG
KILASTLDTP PQWDIGDREY FRHAREHRQD ALAFSEPVIY KAGPREVVVA YEAIRNPAGD
FVGVVAVALD LQRLQDLLLG VDAGRQGMVS IRRSDDGRLV LRLPDHGASR VADITSTEPF
LAIRRGETSG SARYVGIADE VERSFAFQAL RDYPFYVVIG RAISEQFAPW RQTATVATII
ALATLGLLLA LQAALHRSRR QLARSKRSFD ALIDSRREAT CAWRPDTTLL TCNERYAELL
GTEAASLPGT RWIDNVPEAK RAEVHAAIAR MLQGAGTLTT DRRLRQADGR TRWLRWLDLP
VLDEEGRCVE VHSIGQDITA QKEVELRLRQ LALAVEQSPN TIVITDTDGR IEYVNEAFVR
TTGYTAAEAI GQNPRLLNAG KTSAATYADL WATLGRGEVW RGEFINTRKD GGTYTELATI
APIKQADGSV SHYVAIKEDI TGRREAEARI RQLAYYDTLT GLPNRSLMWD RLRHAIAASA
RSGASGMLML LDIDHFKLLN DTQGHEVGDA LLREVAQRLR GALREEDTVA RVGDDDFAIV
VENLGADRDE AIGRAEKIAE HLHRCVTAPC ELGLASGPYH VGASLGLTLF RGRNAAADAV
LKQAEVAVAR AKDDGRNLIR FFSEAMQAVV AARAELELKL RAALACNGFR LYYQPQLDRN
GRVIGAEALI RCFDAEGEMI SPAAFIPLAE ETGLIVPIGE WVLETACAQL RAWQRTPSTA
GLSLSINVSA RQFHQPDFVG KVAAAIERHR IRPGGLEIEL TESVVIGDIE TTVLRMRQIK
ALGVRFALDD FGTGYSSLSY LKRLPFDQLK IDQMFVRDME KDTSSEAIVR AILALSRSLD
LKVVAEGVET AAQHELLLTR GCELFQGYLF GRPVPIEDWK AG
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