| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1325 |
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| Symbol | |
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| ID | 7084446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1460926 |
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| End bp | 1463457 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698342 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002354980 |
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| Protein GI | 217969746 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000657328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTACG TCCACCCGAC CCACGCCCGC GCCGCGCCGC GCAGCCTCGG CGTGCTCGGC
GTCGGCCTCG CCGGCGTGCT CGCGCTGTGG TGGCTGCCCA CGCGCTGGGC CGCCGGGCTG
GCGCACTACC TGCCGCTGCA CCTGGCGCTG GAGACCGCCT CGATCGTCGC CGCCGTGCTG
GTGTTCGCGG TCGCATGGCT GACGCCCGAG CGCAGCGCGG CGGCCAACAC GCGCATCCTG
GGGTGCTGCT TCCTCGGCGT GGCGGTGCTG GATTTCACCC ACATGCTGTC CTACCTCGGC
ATGCCGGACT TCATCACGCC GAGCAGCCCC GAGAAGGCGA TCGATTTCTG GATCGCCGCG
CGCCTGCTGG CCGCGCTCGG CATGCTGACG GCGGTGCTGC TGCCGTGGCG GGTGCACCCC
GGCCTGTCTC CCGGCCTGCT GCTTCTCGCA GTGGGCGCCT ACGTGGGCCT GGCGCACGCG
CTCTTCCTGC CGCGGCCCGA GTGGGCGCCG CGCACCTTCA TCCCGGGCCA GGGGCTGACG
GGGCTGAAGA TCGGCATCGA GATCGGCCTG GTGCTGCTGT TCGCCGCATC CGCCGCCTTG
CTGCTGCGCC GCATGCGCGC GCCCTGCGGC TTCGACGCCC CCGCCCTGTT CGGTGCGGCC
GGGCTGATGG CGCTGAGCGA GCTCTTCTTC ACGATGTACG CGCAGGTCAC CGACCTGTAC
AACCTCGCCG GCCATCTCTA CAAGATCGCC GCGCACGCCC TCCTCTTCCG CGCGCTGGTG
GTGGACGGTA TCCGCCGCCC CTATGCCGCG CTCGAACGCT CGCGGCACGA ACTCGCGGAC
AACTCCGCGC GCCTCGCCGA CGAACGCCAG CGCCTGGAGT CCATCCTCGC GGGCACGCGC
GCGGGCACCT GGGAATGGAA CGTGCAGACC GGGGCGGCCA TCTTCAACGC GCGCTGGGCG
GAGATGCTCG GCTATCGCCT CGACGAGCTC GAACCGCTGT CGATCGACAC CTGGCGGCGC
TTCGCCCACC CGGACGACCT CGCCGACTCG GATGCCGCGG TGCGCCGTCA CCTGCGCGGC
GAGACGCCGT ATTACGAGCA CGAGACCCGC ATGCGCCACC GCGCCGGGCA CTGGATCCAC
GTGCAGGATC GCGGCGTGCT GCGCACCCAC ACCGCCGACG GCGCGCCGGA ATGGATGTTC
GGCACGCATA TCGACATCAC CGACCGCTAC CGCGCCGAGC AGGAGCGCGC CGGGGCGCTG
AAGCGCCTGC GTCAACTCTC GGAGAGCGTG CCCGGCGTGC TCTTCGAGTG TCGCGTGGAA
GACGACGGCA AGGTGAGCTT CCCCTACGTC GGCCGCCAGA TCGAGGCGCT GATCGGCTGC
CGCGCAGAAG AGGCGGAGCA TGACGCCGCA GCCTTCTACG CCCGCCTGCA TCCCGACGAC
GGCGCACGGG TGCGGGACGA GATCCGCCAT GCGCGCCACG GCATGCACGA CTGGAACGCC
TCCTTCCGCG TGGTGCACCC GCTGTACGGC GAACGCCGGA TCCGCGGCGA GGCGCGCTGC
CAGCCGCGGA CTGACGGCGT CGGCGAGTGG TTCGGCTATC TCCAGGACGA GACCGGGACG
CACCGCGACC AGGAGCGCCT GCGCCTGGGC GCACGCGTCT TCGACGCCAG CCAGGAGGGC
ATCCTTGTCA CCGACGCCGC GGTGCGCATC GTGGATATGA ATCCGGCGAT GGAGGCGCTC
AGCGGGCATG CCAAGGCGTC CCTGCTCGGG CGCAACCCGC GCGAGCTCGG CTCGGGCCGA
CACGACGCGG CCTTCTTCGC CGAGATGTAC GCCAGCCTGG CGCGCGACGG GCGCTGGCAG
GGCGAGATCT GGAACCGCCA TGCATCGGGC GAGATCTACG TGGTGAAGGC GTCGATGTCC
ACCGTGCTCG ACGAGTCCGG CCGCATCGAG CATTACGTCG GCGTGTTCAC CGACATCAGC
GCGCTGACGG CGCAGCGCGA CCACTTCAGC TCGCTCGCCA ACTTCGACGC CCTCACCGGC
CTGCCCAACC GCCGCCTGCT CGACGACCGC CTGCAGCAAG CGGTGGGCAA TGCGCGCCGC
GGCAAGCCGC TGGTCGTGTG CATGCTCGAC CTCGACGGCT TCAAGCCGGT CAACGACAGC
GTCGGCCACG CCGAGGGCGA CCGCCTGCTG GTCGAGCTCG CGCAGCGCAT GCAGCACATC
CTGCGCGCGG GCGAGACCTT GGCCCGCCTC GGCGGCGACG AGTTCGTCCT GCTGCTGGTG
GACGGCGACT TCCGCCCGGC ACTCGAGCGC GTGCTCGAGG TGACGCGCGC GCCGGTGGCG
CTGTCCGGCG GGCGCTTCGC CCGCGTCACC GCGAGCATCG GCGCGAGCGC GTACCGGCAC
GGCGTCGAGG ATGGCGCACA GCTGCTGCGC GAGGCCGACC AGGCGCTCTA CCGCGCCAAG
CGCGCCGGGC GCAACCGCTG GGTGATGTTC GCGCCGGAAG CTGCAGCCGG GGTGGAGACC
CCGCCGGCCT AG
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| Protein sequence | MAYVHPTHAR AAPRSLGVLG VGLAGVLALW WLPTRWAAGL AHYLPLHLAL ETASIVAAVL
VFAVAWLTPE RSAAANTRIL GCCFLGVAVL DFTHMLSYLG MPDFITPSSP EKAIDFWIAA
RLLAALGMLT AVLLPWRVHP GLSPGLLLLA VGAYVGLAHA LFLPRPEWAP RTFIPGQGLT
GLKIGIEIGL VLLFAASAAL LLRRMRAPCG FDAPALFGAA GLMALSELFF TMYAQVTDLY
NLAGHLYKIA AHALLFRALV VDGIRRPYAA LERSRHELAD NSARLADERQ RLESILAGTR
AGTWEWNVQT GAAIFNARWA EMLGYRLDEL EPLSIDTWRR FAHPDDLADS DAAVRRHLRG
ETPYYEHETR MRHRAGHWIH VQDRGVLRTH TADGAPEWMF GTHIDITDRY RAEQERAGAL
KRLRQLSESV PGVLFECRVE DDGKVSFPYV GRQIEALIGC RAEEAEHDAA AFYARLHPDD
GARVRDEIRH ARHGMHDWNA SFRVVHPLYG ERRIRGEARC QPRTDGVGEW FGYLQDETGT
HRDQERLRLG ARVFDASQEG ILVTDAAVRI VDMNPAMEAL SGHAKASLLG RNPRELGSGR
HDAAFFAEMY ASLARDGRWQ GEIWNRHASG EIYVVKASMS TVLDESGRIE HYVGVFTDIS
ALTAQRDHFS SLANFDALTG LPNRRLLDDR LQQAVGNARR GKPLVVCMLD LDGFKPVNDS
VGHAEGDRLL VELAQRMQHI LRAGETLARL GGDEFVLLLV DGDFRPALER VLEVTRAPVA
LSGGRFARVT ASIGASAYRH GVEDGAQLLR EADQALYRAK RAGRNRWVMF APEAAAGVET
PPA
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