Gene Tmz1t_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1317 
Symbol 
ID7085482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1451180 
End bp1453381 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content74% 
IMG OID643698334 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002354972 
Protein GI217969738 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.460815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTCT CCCAGGCCCT GGCCACCTTC CTCGACGAGA GCCGCGAGCT GCTCGCGCAG 
ATGGAGGAGA TCCTCCTGCG CGCCGAGACC GCCGCGCTGC CGACCGACGA GCTGCACGCG
CTGTTCCGTT GCGCCCACAC CATCAAGGGC TCGGCCGGCC TGTTCGGGCT GGACGCGGTG
GTGCACTTCA CCCACGCCGT CGAGAGCGTG CTCGACCGCA TGCGCAACGG CGAACTCGAA
CTCTCCGACG CCCTGATCAA CCTGCTGCTC GAGTCGCAGG ACCACATCGC CAGCCTCGTC
GCCGCGGTCG CCGCCGAACT TCCTCCGCCC GAGTTCGAGG GCGCGCCGCT GCGCGCCCGC
CTCGAAGCCT TCTGCGCCGC GACGCCCGCC ACCCCCGCCG CACTGCCGGC GACCGTGGCG
GAGGGGGACC CGGTCGTCTG CTCCGCGACC GAGGCCGCGC CCGCGCTCGA GGTCGGCGGC
AGCGTGGCGC TCGGCGCCGA GCACTGGCAC CTGTCGCTGC GCTTCGCGCC CGAGGTGCTC
AGGAACGGCA TGGACCCGCT CGCCTTCATC CACTACCTGC GCACCCTCGG CGAGCTCGTG
CACGTCGAGA CCATCGCCGA CACCCTGCCC GAGCTTGCCG CCGGCGACCC GGAAAACTGC
TACCTCGGCT TCGAGATCGC GCTGCGCAGC ACGGCCCCCC GCGCCGAGAT CGAGGCGGTG
TTCGAGTTCG TGCAGGACAG CGCGCGCATC GTGCTGGTGC CGCCGGCGGC GCGCGTCGAG
GAGTACCTCG CCCTCATCGA GGCGCTCGAC GAGGACCCGC GCCGACTCGG CGAGATCCTC
GTGACCTGCG GCTCGGTCAC CGCGCGCGAG CTCGAGGCCG CGCTCGCCGC CCAGCACGTG
CAGGCCGAGG CGCCGCGCGT GGGCGAGCTG CTGGTCGAGC ACGCCGGTGT GCCCGCCCAG
GTGGTGCAGG CCGCGCTCGG CAAGCAGAAG GCCGCCGAGG AGCGCCGCGC CAGCGAGACG
CGCAGCGTCA AGGTGCCCGC CGACCGGCTC GACGCGCTCA TCGACCAGGT CGGCGAGCTC
GTCATCGCCG GCGCCGCCAC CCAGCTGCAG GCGCAGCAGG CCGGCAGCCG CGCGCTGCAG
GAGACCGCCG CCAACCTGCT GCGCCTGGTC GAGGACGTGC GCGACGCCGC GCTGCGCCTG
CGCATGACCC CGATCGGCGA GGTCTTCAAC CGCTTCCCGC GCGTGGTGCG CGACCTCGCG
CGCGAGCTCG GCAAGGACAT CGAGCTGGTG ATCCGCGGCG CCGAGGCCGA GCTCGACAAG
TCCATGGTCG AGAAGATCGG CGACCCGCTC ATGCACCTCG TGCGCAACGC CCTCGACCAC
GGCATCGAAT CGCCCGAACG CCGCGCCGCG GCGGGCAAGC CGGCGCGCGG CCGGGTCGAG
CTGCGCGCCT TCCACGAGTC GGGCAGCATC GTCATCGAGG TCGCCGACGA CGGCGGCGGG
CTGGACGCGC GGCGCATCCT CGCCAAGGCC GTCGAGCGCG GCCTGGTCGC GGCGGACGCC
GTGCTCTCCG AGGCCGAGAT CCACCGCCTC GTCCTGGCGC CGGGCTTCTC CACCGCGGCC
GAACTCACCA GCCTGTCCGG CCGCGGCGTC GGCATGGACG TGGTCAAGAG CAGCGTCGAT
GCGCTGCGCG GCACCCTCGA CATCCACAGC GCGCCGGGCT GCGGCACCAC GATGCGGCTG
TGCCTGCCGC TCACGCTGGC GATCATCGAC GGCTTCCAGG TCGGTGTCGC CGGCGCCACC
TTCATCCTGC CGCTCGACGC GGTGGTCGAG TGCATCGAGC TGCCGGCCGA CGCCGGCGCC
GCCGGCTACC TCGACCTGCG CGGCCAGGTC CTGCCCTTCC TGCGCCTGCG CGCCCTGTTC
GCGCTCGAGG GCGCACCGCC GCCGCGGCAG AACGTGGTCG TGGTGCGCTT CGGCGGGCGC
CAGGCGGGGA TCGCGGTGGA CCATCTGCTC GGCGAATGCC AGGCGGTGAT CAAGCCGCTC
GGGCCGCTCT TCGAGCGCGT CGCCGGCATC GCCGGCTCCA CCATCCTGGG CAGCGGCGAG
GTGGCGCTGA TCCTGGACGT GCCACAACTG GTCCAGCGTG CGATCGCGCA CGAGGGCCGC
GACACCGGGG GTGCGCCGCG GGCGCGCTTC CTTGCTGCAT GA
 
Protein sequence
MDLSQALATF LDESRELLAQ MEEILLRAET AALPTDELHA LFRCAHTIKG SAGLFGLDAV 
VHFTHAVESV LDRMRNGELE LSDALINLLL ESQDHIASLV AAVAAELPPP EFEGAPLRAR
LEAFCAATPA TPAALPATVA EGDPVVCSAT EAAPALEVGG SVALGAEHWH LSLRFAPEVL
RNGMDPLAFI HYLRTLGELV HVETIADTLP ELAAGDPENC YLGFEIALRS TAPRAEIEAV
FEFVQDSARI VLVPPAARVE EYLALIEALD EDPRRLGEIL VTCGSVTARE LEAALAAQHV
QAEAPRVGEL LVEHAGVPAQ VVQAALGKQK AAEERRASET RSVKVPADRL DALIDQVGEL
VIAGAATQLQ AQQAGSRALQ ETAANLLRLV EDVRDAALRL RMTPIGEVFN RFPRVVRDLA
RELGKDIELV IRGAEAELDK SMVEKIGDPL MHLVRNALDH GIESPERRAA AGKPARGRVE
LRAFHESGSI VIEVADDGGG LDARRILAKA VERGLVAADA VLSEAEIHRL VLAPGFSTAA
ELTSLSGRGV GMDVVKSSVD ALRGTLDIHS APGCGTTMRL CLPLTLAIID GFQVGVAGAT
FILPLDAVVE CIELPADAGA AGYLDLRGQV LPFLRLRALF ALEGAPPPRQ NVVVVRFGGR
QAGIAVDHLL GECQAVIKPL GPLFERVAGI AGSTILGSGE VALILDVPQL VQRAIAHEGR
DTGGAPRARF LAA