| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1304 |
|---|
| Symbol | |
|---|
| ID | 7085469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1436016 |
|---|
| End bp | 1436528 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643698321 |
|---|
| Product | Tripartite ATP-independent periplasmic transporter DctQ component |
|---|
| Protein accession | YP_002354959 |
|---|
| Protein GI | 217969725 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.678951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGT ATCTGTCCCG CATCCGCAAG GGCGTCGAGG CGCTGCTCAT CCTGACCCTG
GCGGGCATGG TGCTGCTGAC CTTCATCGAC GTCATCGGCC GCCGCCTGTT CGGCGCGCCG
CTCTACGGCG CGCACGACGC CACCGAGCAT CTGATGGCGA TCATGGTGTT CTGCGGCCTG
CCGCTGCTTA CCGCGGCGCG CGGCCACCTC ACCGTCGATC TGTTCGACAA GTGGCTGCTA
CGCCCGGGCT GGGTGTGGTG GCACCGGCTG GTGTCGGCGC TGGTGGCGCT GGTGCTGCTG
CTGATCGCCT ACGAGTTCCT GAACTCGGCC ATCGAGGCCG GCAAGATCCA GGAGATCAGC
CAGTCGCTGT CGATCCCGCG CGGCGGCATG TATGGCTTCA TCGCCTTCAC CTCGCTGCTG
TCGGCCCTGG CCGCGTTGCT GGGCTGTTTT GCCGCGCCGC CCTCGCATCC CGTCACCGTC
CAGTCCCACG CCACCCAGGA GCGTGCCAAA TGA
|
|---|
| Protein sequence | MDAYLSRIRK GVEALLILTL AGMVLLTFID VIGRRLFGAP LYGAHDATEH LMAIMVFCGL
PLLTAARGHL TVDLFDKWLL RPGWVWWHRL VSALVALVLL LIAYEFLNSA IEAGKIQEIS
QSLSIPRGGM YGFIAFTSLL SALAALLGCF AAPPSHPVTV QSHATQERAK
|
|---|
| |