Gene Tmz1t_1263 details

Gene Information

• Locus tag: Tmz1t_1263
• ID: 7085427
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 1394701
• End bp: 1396557
• Gene Length: 1857 bp
• Protein Length: 618 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643698279
• Product: Na+/solute symporter
• Protein accession: YP_002354918
• Protein GI: 217969684
• COG category: [R] General function prediction only
• COG ID: [COG4147] Predicted symporter
• TIGRFAM ID: [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.625499
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCTCC AAACCGTTAC CTACCTGGTG GTCGGCGCCT CGTTCGCGCT GTACATCGGC 
ATCGCCATCT GGGCGCGCGC CGGCAGCACC AGCGAGTTCT ACGCCGCGGG CGGCAGCGTG 
CACCCGATCA CCAACGGCAT GGCCACGGCG GCCGACTGGA TGTCGGCGGC TTCCTTCATT 
TCCATGGCGG GCCTGATCGC CAACATGGGC TACGGCGGCG GCCTGTTCCT GATGGGCTGG 
ACCGGCGGCT ACGTCCTGTT GGCGATGTTG CTGGCGCCGT ACCTGCGCAA GTTCGGCAAG 
TTCACCGTGC CGCAGTTCAT CGGCGACCGC TTCTACTCGA AGACGGCTTC GACGGTGGCG 
GTGGTGTGCC TGTTGACCGC GTCGCTGACC TACATCATCG GTCAGATGAC TGGCGTCGGC 
GTGGCCTTCT CGCGCTTCCT CGGCGTCTCG AGCGACACCG GCATCTACAT CGGCCAGGCG 
ATCGTGTTCC TGTACGCGGT GTTTGGCGGC ATGAAGGGCA TCACCTACAC CCAGGTCGCG 
CAGTACATCG TGCTGATCGC CGCCTACCTG GTGCCGGCCT TCTTCATCTC GCTGCAGCTC 
ACCGGCAACC CGCTGCCGCA GCTCGGCCTC GGGTCGACCA TGGCTGGCAC CGATGTCTCG 
CTGCTCGCCA AGCTCGACCT CATCGTGAAG GATCTGGGCT TCGACCAGTA CACGACCTCG 
ATCCCGGGCA GCACGCTCAA CATGTTCATG TACACCCTGT CGCTGATGAT CGGCACCGCG 
GGCCTGCCGC ACGTCATCAT GCGCTTCTTC ACCGTTCCGA CGGTGAAGGA CGCGCGCAGT 
TCGGCGGGTT GGGCGCTGAT CTTCATCGCC CTGCTGTACA CCACTGCACC TGCGGTCGGC 
GCGATGGCCA AGCTGAACCT GCACGGCACG GTGAACTCGG CGGTCGGTCT CGAGACCAAC 
GCCGCAGGCA AGCTGGCGGT GAACCCGGCC ACGGTCAAGG CCAACGCCGA CCTGTACGCC 
ACCGAGTCCA GCCTGCAGTA CGAGCAGCGC CCCGAGTGGA TGAAGCGTTG GGAGAAGACC 
GGTCTGCTGA AGTTCGAGGA CAAGAACGGC GACGGCCGCA TCCAGTACTA CAACGACAAG 
ACCAAGGACG CCGATGCCAA GGCCAAGGCC GCGGCCGCGG GTTGGAAGGG CAACGAGCTC 
ACGGTGAACG CCGACATCAT GGTGATGGCG AACCCCGAGA TCGCGCTGCT GCCCAACTGG 
GTGATCGCGC TGGTCGCCGC GGGTGGTCTG GCTGCCGCAT TGTCGACCGC CGCCGGTCTG 
CTGATGGCGA TCTCGTCCGC GGTGTCGCAC GACCTGGTGA AGAACGTGTT TGCGCCGAGC 
ATCAGCGACA AGAACGAGCT GCTGGTGGGC AAGATCTCGA TGGCGGTCGC GATCGTGATC 
TCCGGCTACC TCGGTCTCAA CCCGCCGGGC TTCGCCGCCG GTACGGTCGC GCTGGCCTTC 
GGTATCGCCG CCTCGTCGCT GTTCCCGGCG ATCATGATGG GCATCTTCTC CAAGAAGATG 
AACAAGGAAG GCGCGATCGC GGGCATGCTG GCCGGCCTCT TCGTCACGCT GTTCTACGTG 
TTCGCGCACA AGGGCATCTT CTTCGTGAAG GGCACCGAGT TCATCGACCT GATCGGCGGC 
CCGAACAGCT TCTTCGGCAT CACGCCGGAA GCCTTCGGTG CGGTGGGTGC GATGGTGAAC 
TTCATCGTTG CGGTCGTGGT CGACAAGGTG ACCAAGGAGC CGCCGGAGCA CATCCAGCAC 
ATGGTCGAGT CGGTGCGTAT CCCGCGCGGT TCGAAGCTGG TGGACGGCGC CCACTAA 

 

Protein sequence

MDLQTVTYLV VGASFALYIG IAIWARAGST SEFYAAGGSV HPITNGMATA ADWMSAASFI 
SMAGLIANMG YGGGLFLMGW TGGYVLLAML LAPYLRKFGK FTVPQFIGDR FYSKTASTVA 
VVCLLTASLT YIIGQMTGVG VAFSRFLGVS SDTGIYIGQA IVFLYAVFGG MKGITYTQVA 
QYIVLIAAYL VPAFFISLQL TGNPLPQLGL GSTMAGTDVS LLAKLDLIVK DLGFDQYTTS 
IPGSTLNMFM YTLSLMIGTA GLPHVIMRFF TVPTVKDARS SAGWALIFIA LLYTTAPAVG 
AMAKLNLHGT VNSAVGLETN AAGKLAVNPA TVKANADLYA TESSLQYEQR PEWMKRWEKT 
GLLKFEDKNG DGRIQYYNDK TKDADAKAKA AAAGWKGNEL TVNADIMVMA NPEIALLPNW 
VIALVAAGGL AAALSTAAGL LMAISSAVSH DLVKNVFAPS ISDKNELLVG KISMAVAIVI 
SGYLGLNPPG FAAGTVALAF GIAASSLFPA IMMGIFSKKM NKEGAIAGML AGLFVTLFYV 
FAHKGIFFVK GTEFIDLIGG PNSFFGITPE AFGAVGAMVN FIVAVVVDKV TKEPPEHIQH 
MVESVRIPRG SKLVDGAH