Gene Tmz1t_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1254 
SymbolradC 
ID7085418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand- 
Start bp1386914 
End bp1387591 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content70% 
IMG OID643698270 
ProductDNA repair protein RadC 
Protein accessionYP_002354909 
Protein GI217969675 
COG category[L] Replication, recombination and repair 
COG ID[COG2003] DNA repair proteins 
TIGRFAM ID[TIGR00608] DNA repair protein radc 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.700963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATCA CCGACTGGCC TGCGGACGAA CGTCCGCGCG AGAAGCTCCT CGCCCGCGGC 
GCCGCGGCGC TGTCCGACGC GGAGCTGCTG GCGATCTTCC TGCGCGTGGG CATCCGCGGG 
CAGAGCGCGG TCGACCTCGC CCGCGCGCTG CTGTCCCGCT TCGGCACCCT GACCCGCATG 
TGCGGCGCCG ACGCGAACGA GTTCGCCGCG GTACCTGGCA TGGGGCTGGC GAAGTATGCC 
CAACTGCAGG CGGTCATGGA ACTGTCGCGG CGGGCACTCG CCGAGACGCT GGTTGCACGC 
CCGCTGTTCG ATTCACCCCA GGTCGTACGC GACTGGCTGC GCCTGCGCCT CGGACACCTG 
CCCCACGAGA CCTTCTGCGT GCTGCTGCTC GACGCACGCC ACTGCCTGAT CGAGGCGGTG 
GATCTCTTCC GCGGCACGCT CACGCAGACC TCGGTGTATC CTCGCGAGGT GGTCAAGCTC 
GCCCTCGCGC GCAACGCCGC GGCCGTGATC CTCGCCCACA ACCATCCCTC CGGTGCCGCC 
GAGCCGAGCA CCGCCGACGA GCTGCTCACG CGTGCGCTGA AGGACGCTCT CGGCCTGGTC 
GACGTGCGCG TGCTCGATCA TTTCGTGGTG CCGGCGCACG GTCATCCGGT ATCATTCGCC 
GAACGCGGCC TGCTTTGA
 
Protein sequence
MAITDWPADE RPREKLLARG AAALSDAELL AIFLRVGIRG QSAVDLARAL LSRFGTLTRM 
CGADANEFAA VPGMGLAKYA QLQAVMELSR RALAETLVAR PLFDSPQVVR DWLRLRLGHL 
PHETFCVLLL DARHCLIEAV DLFRGTLTQT SVYPREVVKL ALARNAAAVI LAHNHPSGAA 
EPSTADELLT RALKDALGLV DVRVLDHFVV PAHGHPVSFA ERGLL