Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1247 |
Symbol | |
ID | 7085411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1380683 |
End bp | 1381996 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643698263 |
Product | isocitrate lyase |
Protein accession | YP_002354902 |
Protein GI | 217969668 |
COG category | [C] Energy production and conversion |
COG ID | [COG2224] Isocitrate lyase |
TIGRFAM ID | [TIGR01346] isocitrate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.725065 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCCTGA CCCGCGAACA GCAAATCGCC GCCCTCGAAA AAGACTGGGC CGAGAATCCC CGTTGGAAAG GCATCAAGCG CGGCTACTCC GCGGCCGACG TGGTCCGCCT GCGTGGCAGC CTGCAGCCCG AGTACACCCT GGCCCAGCGT GGTGCCAAGC TGCTGTGGGA GCGTGTCAAT GGCGGCGCCA AGAAGGGCTA TGTGAACGCC TTCGGCGCGA TCACCGCCGG TCAGGCGATG CAGCAGGCCA AGGCCGGTCT CGAAGCCGTG TATCTGTCCG GCTGGCAGGT CGCCGCCGAC GGCAACACCT CCGAGACCAT GTATCCCGAC CAGTCGCTGT ACGCCTACGA CTCGGTCCCG ACCATGGTTC GCCGCATCAA CAACACCTTC AAGCGTGCCG ACGAGATCCA GTGGTCGCGT GGCATCAACC CGGGCGACAA GGAATTCGTC GACTACTTCC TGCCGATCGT CGCCGACGCC GAGGCCGGTT TCGGCGGCGT GCTGAACGCC TTCGAGCTGA TGAAGAACAT GATCGCCGCC GGCGCCGCCG GTGTGCATTT CGAAGACCAG CTCGCTGCCG TGAAGAAGTG CGGCCACATG GGCGGCAAGG TGCTGGTGCC GACCCAGGAA GCCTGCGAGA AGCTGATCGC CGCCCGCTTC GCCGCCGACG TCATGGGTGT GCCGACCATC ATCCTGGCCC GCACCGACGC CGAAGCCGCC AACCTCATCA CCTCCGACCA CGACGCCAAC GACAAGCCCT TCCTTACCGG TGAGCGCACC CAGGAAGGCT TCTACCGTGT CAAGAACGGC CTCGAGCAAT CGATCAGCCG CGGCGTCGCC TACGCCCCCT ACGCCGACCT GGTGTGGTGC GAGACCGGTA CCCCGGACCT GGGCTTCGCC CGCGAGTTCG CCCAGGCCGT GCATGCCGCC CACCCCGGCA AGCTGCTGTC CTACAACTGC TCGCCGTCCT TCAACTGGAA GAAGAACCTG GACGACAAGA CCATCGCCAA GTTCCAGGAC GAACTCTCGG CGCTGGGCTA CAAGTACCAG TTCATCACCC TGGCCGGCAT CCACATCAAC TGGTTCAACA CCTTCAAGTT CGCCCACGCC TACGCCCGCG GCGAAGGCAT GAAGCACTAC ACCGAGATGG TGCAGGAACC GGAATTCGCC GCTCGCGAGC AGGGCTACAC CTTCGTGTCG CACCAGCAGG AAGTCGGCGC CGGCTACTTC GACGACGTCA CCACCGTGAT CCAGGGTGGC TCGTCCTCGG TCAAGGCGCT GACGGGCTCG ACCGAAGAAG AGCAGTTCCA CTAA
|
Protein sequence | MTLTREQQIA ALEKDWAENP RWKGIKRGYS AADVVRLRGS LQPEYTLAQR GAKLLWERVN GGAKKGYVNA FGAITAGQAM QQAKAGLEAV YLSGWQVAAD GNTSETMYPD QSLYAYDSVP TMVRRINNTF KRADEIQWSR GINPGDKEFV DYFLPIVADA EAGFGGVLNA FELMKNMIAA GAAGVHFEDQ LAAVKKCGHM GGKVLVPTQE ACEKLIAARF AADVMGVPTI ILARTDAEAA NLITSDHDAN DKPFLTGERT QEGFYRVKNG LEQSISRGVA YAPYADLVWC ETGTPDLGFA REFAQAVHAA HPGKLLSYNC SPSFNWKKNL DDKTIAKFQD ELSALGYKYQ FITLAGIHIN WFNTFKFAHA YARGEGMKHY TEMVQEPEFA AREQGYTFVS HQQEVGAGYF DDVTTVIQGG SSSVKALTGS TEEEQFH
|
| |