Gene Tmz1t_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1247 
Symbol 
ID7085411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1380683 
End bp1381996 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content65% 
IMG OID643698263 
Productisocitrate lyase 
Protein accessionYP_002354902 
Protein GI217969668 
COG category[C] Energy production and conversion 
COG ID[COG2224] Isocitrate lyase 
TIGRFAM ID[TIGR01346] isocitrate lyase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.725065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGA CCCGCGAACA GCAAATCGCC GCCCTCGAAA AAGACTGGGC CGAGAATCCC 
CGTTGGAAAG GCATCAAGCG CGGCTACTCC GCGGCCGACG TGGTCCGCCT GCGTGGCAGC
CTGCAGCCCG AGTACACCCT GGCCCAGCGT GGTGCCAAGC TGCTGTGGGA GCGTGTCAAT
GGCGGCGCCA AGAAGGGCTA TGTGAACGCC TTCGGCGCGA TCACCGCCGG TCAGGCGATG
CAGCAGGCCA AGGCCGGTCT CGAAGCCGTG TATCTGTCCG GCTGGCAGGT CGCCGCCGAC
GGCAACACCT CCGAGACCAT GTATCCCGAC CAGTCGCTGT ACGCCTACGA CTCGGTCCCG
ACCATGGTTC GCCGCATCAA CAACACCTTC AAGCGTGCCG ACGAGATCCA GTGGTCGCGT
GGCATCAACC CGGGCGACAA GGAATTCGTC GACTACTTCC TGCCGATCGT CGCCGACGCC
GAGGCCGGTT TCGGCGGCGT GCTGAACGCC TTCGAGCTGA TGAAGAACAT GATCGCCGCC
GGCGCCGCCG GTGTGCATTT CGAAGACCAG CTCGCTGCCG TGAAGAAGTG CGGCCACATG
GGCGGCAAGG TGCTGGTGCC GACCCAGGAA GCCTGCGAGA AGCTGATCGC CGCCCGCTTC
GCCGCCGACG TCATGGGTGT GCCGACCATC ATCCTGGCCC GCACCGACGC CGAAGCCGCC
AACCTCATCA CCTCCGACCA CGACGCCAAC GACAAGCCCT TCCTTACCGG TGAGCGCACC
CAGGAAGGCT TCTACCGTGT CAAGAACGGC CTCGAGCAAT CGATCAGCCG CGGCGTCGCC
TACGCCCCCT ACGCCGACCT GGTGTGGTGC GAGACCGGTA CCCCGGACCT GGGCTTCGCC
CGCGAGTTCG CCCAGGCCGT GCATGCCGCC CACCCCGGCA AGCTGCTGTC CTACAACTGC
TCGCCGTCCT TCAACTGGAA GAAGAACCTG GACGACAAGA CCATCGCCAA GTTCCAGGAC
GAACTCTCGG CGCTGGGCTA CAAGTACCAG TTCATCACCC TGGCCGGCAT CCACATCAAC
TGGTTCAACA CCTTCAAGTT CGCCCACGCC TACGCCCGCG GCGAAGGCAT GAAGCACTAC
ACCGAGATGG TGCAGGAACC GGAATTCGCC GCTCGCGAGC AGGGCTACAC CTTCGTGTCG
CACCAGCAGG AAGTCGGCGC CGGCTACTTC GACGACGTCA CCACCGTGAT CCAGGGTGGC
TCGTCCTCGG TCAAGGCGCT GACGGGCTCG ACCGAAGAAG AGCAGTTCCA CTAA
 
Protein sequence
MTLTREQQIA ALEKDWAENP RWKGIKRGYS AADVVRLRGS LQPEYTLAQR GAKLLWERVN 
GGAKKGYVNA FGAITAGQAM QQAKAGLEAV YLSGWQVAAD GNTSETMYPD QSLYAYDSVP
TMVRRINNTF KRADEIQWSR GINPGDKEFV DYFLPIVADA EAGFGGVLNA FELMKNMIAA
GAAGVHFEDQ LAAVKKCGHM GGKVLVPTQE ACEKLIAARF AADVMGVPTI ILARTDAEAA
NLITSDHDAN DKPFLTGERT QEGFYRVKNG LEQSISRGVA YAPYADLVWC ETGTPDLGFA
REFAQAVHAA HPGKLLSYNC SPSFNWKKNL DDKTIAKFQD ELSALGYKYQ FITLAGIHIN
WFNTFKFAHA YARGEGMKHY TEMVQEPEFA AREQGYTFVS HQQEVGAGYF DDVTTVIQGG
SSSVKALTGS TEEEQFH