Gene Tmz1t_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1228 
Symbol 
ID7083888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand+ 
Start bp1363204 
End bp1363797 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content64% 
IMG OID643698244 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_002354883 
Protein GI217969649 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.00110033 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGACC GTGAAGGCTT TCGCCCGAAC GTCGGCATCA TTCTGGTCAA TGCGCGCAAC 
GAGGTCTTCT GGGGCAAGCG CATCCGCGAA CATTCCTGGC AGTTTCCACA AGGTGGCATC 
AAGCACGGCG AGTCGCCGGA GCAGGCCATG TATCGGGAAC TCCACGAAGA GGTCGGCCTG 
CGGCCCGAGC ACGTCAGGAT CCTCGGCCGT ACGCGCGGAT GGTTGCGCTA TGAGGTTCCC 
AAGCACTGGA TCCGGCGCGA GTGGCGCAAC ACCTACCGTG GGCAGAAGCA GATCTGGTTC 
CTGCTCCGCC TGGTGGGGCG CGACTCCGAC GTCTGTCTGC GCGCGAGCAC TCATCCGGAA 
TTCGATGCCT GGCGCTGGAG CAACTACTGG GTGCCGCTGG AAGCGGTGAT CGAATTCAAG 
CGCCAGGTGT ATCAGCTGGC CTTGATCGAA CTGGCGCGCA TCCTGTTTCG TTCGCGCAGC 
GTCGAGTTGC CGGACAGCTA TCGACTGCCC GAACCGGAAC CCGCTCCCGA GCCGGTGCGG 
GTGGTGCTCG GCGAGCGCGC CGAGCACGGA CTGCGCGATG CGATGCGGAA GTAG
 
Protein sequence
MLDREGFRPN VGIILVNARN EVFWGKRIRE HSWQFPQGGI KHGESPEQAM YRELHEEVGL 
RPEHVRILGR TRGWLRYEVP KHWIRREWRN TYRGQKQIWF LLRLVGRDSD VCLRASTHPE 
FDAWRWSNYW VPLEAVIEFK RQVYQLALIE LARILFRSRS VELPDSYRLP EPEPAPEPVR 
VVLGERAEHG LRDAMRK