| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1227 |
|---|
| Symbol | |
|---|
| ID | 7083887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 1361288 |
|---|
| End bp | 1363036 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643698243 |
|---|
| Product | prolyl-tRNA synthetase |
|---|
| Protein accession | YP_002354882 |
|---|
| Protein GI | 217969648 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0442] Prolyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.463936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCA GCCAGTTCCA TCTCTTCACC CTCAAGGAAG CCCCCTCCGA CGCCGAGGTC
GTCAGCCAGA AGCTGATGCT GCGCGCCGGC ATGATCCGCA AGGTCGCCGC CGGCATCTAC
AGCTACATGC CGATGGGCCT GCGCGCGATC CGCAAGGTCG AGGCCATCGT GCGCGAGGAG
ATGGACCGCG CCGGCGCCAT GGAACTGATC ATGCCGATGG TGCAGCCCGC CGAGCTGTGG
GACGAGACCG GGCGCTGGGA CAAGATGGGC GACGAGCTGC TGCGCTTCAA GGACCGCCAC
GAGCGCGACT TCGCGCTGCA ACCCACCTCC GAGGAGGTCG TCACCGACAT CGCGCGCCAG
GAGCTCAAGA GCTACCGCCA GCTGCCGAAG AACTTCTACC AGATCCAGAC CAAGTTCCGC
GACGAACGCC GGCCGCGCTT CGGCGTCATG CGCGGGCGCG AATTCACCAT GAAGGACGCC
TACTCCTTCG ACCGCAGCGA GGAAGCCGCC GGGCGCAGCT ACGACATCAT GTTCGCCGCC
TACAAGCGCA TCTTCGACCG CCTCGGCCTC GAATACCGCG CGGTGGCGGC CGACACCGGC
GCCATCGGCG GCGACCGCTC GCACGAGTTC CAGGTCATCG CCGACACCGG CGAGGACGCC
ATCGTCTACT GCCCCGACTC CGACTACGCT GCCAACATCG AGCTCGCCGA GGCGGTGTCC
CTGCTCGCCC GCCGCGCAGA GCCCGCCCGG GCGCTGGCAA AAACCCCCAC ACCGGGCAAG
GCGACCTGCG AGGACGTCGC CGCGCTGCTG GGCGTGCCGC TGGCGACCAC GGTGAAGTCG
CTGGTACTCG CCACCGACGA TGTCGATGAA AAGGGCAAGC CCGCCGGCGT CACCGTGTGG
CTGCTGCTGG TGCGCGGCGA CCACGCCCTC AACGAGGTCA AGGCCGGCAA GCTGGAAGGC
CTCAAGGCAG GCTTCCGCTT CGCCACCGAG GCCGAGATCC TCGAACACTT CGGCTGCAAG
CCGGGCTACC TCGGCCCCAT CGGTCTGAAG AAGCCGGTCA AGGTCATCGC CGACCGCACG
GTCGCCCACA TGGCCGACTT CATCTGCGGC GCCAACGAGG CCGACTTCCA CTTCACCGGC
GTGAACTGGG GCCGCGACCT GCCCGAGCCC GACCAGGTCG CCGACCTGCG CAACGTCGTC
GAGGGCGACC CCAGCCCGGA CGGCCGCGGC GTGCTCGCCA TCCAGCGCGG CATCGAGGTC
GGTCACGTGT TCTACCTCGG CACCAAGTAC TCCAAGGCGA TGAACGCCAC CTTCCTCGAC
GAGGACGGCA AGCCCAAGCA CTTCGAAATG GGCTGCTACG GCATCGGCGT GACCCGCATC
CTGGGCGCCG CGATCGAGCA GAACCACGAC GCCCGCGGCA TCGTCTGGCC GCGCGCGATC
GCACCCTTCG AGGTGGTGGT CTGCCCGGTC GGCTGGGGCA AGTCGCAGGC GGTGCGCGAC
GAGGCGCAGA AGCTCTACGA CGCGCTCGTC GCCACCGGCG TCGACGCCAT CCTCGACGAC
CGCGACGAGC GCCCGGGCGT GATGTTCGCC GACTGGGAAC TGATCGGCGT GCCGCACCGC
GTCACCATCG GCGACCGCGG GCTCAAGGAA GGCGTGATCG AATACCAGGG CCGGCGCGAT
GCCGAAGCCG CCAAGCTGCC CGCAGGCGAG GTCCTCGGCC ACGTGCTCGA GCGCCTGAAC
CAGGGCTGA
|
|---|
| Protein sequence | MRASQFHLFT LKEAPSDAEV VSQKLMLRAG MIRKVAAGIY SYMPMGLRAI RKVEAIVREE
MDRAGAMELI MPMVQPAELW DETGRWDKMG DELLRFKDRH ERDFALQPTS EEVVTDIARQ
ELKSYRQLPK NFYQIQTKFR DERRPRFGVM RGREFTMKDA YSFDRSEEAA GRSYDIMFAA
YKRIFDRLGL EYRAVAADTG AIGGDRSHEF QVIADTGEDA IVYCPDSDYA ANIELAEAVS
LLARRAEPAR ALAKTPTPGK ATCEDVAALL GVPLATTVKS LVLATDDVDE KGKPAGVTVW
LLLVRGDHAL NEVKAGKLEG LKAGFRFATE AEILEHFGCK PGYLGPIGLK KPVKVIADRT
VAHMADFICG ANEADFHFTG VNWGRDLPEP DQVADLRNVV EGDPSPDGRG VLAIQRGIEV
GHVFYLGTKY SKAMNATFLD EDGKPKHFEM GCYGIGVTRI LGAAIEQNHD ARGIVWPRAI
APFEVVVCPV GWGKSQAVRD EAQKLYDALV ATGVDAILDD RDERPGVMFA DWELIGVPHR
VTIGDRGLKE GVIEYQGRRD AEAAKLPAGE VLGHVLERLN QG
|
|---|
| |