Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1196 |
Symbol | |
ID | 7083856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | - |
Start bp | 1324659 |
End bp | 1325588 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643698212 |
Product | tyrosine recombinase XerD |
Protein accession | YP_002354851 |
Protein GI | 217969617 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0670859 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGAC GCGCGCCGGC ACGCGAAGCC GGCCTGCAGC CCGCGCACCG CGCCGAGCTC GACCGCTTCG CCGATGCGCT CTGGCTCGAG CACGGGCTGG CCAGGAACAC CCTCGCCGGC TACCGCAGCG ACCTCGCCCG CTTCGCCGCC TGGCTGGAGA CGCGTGCGCA ACGCCTGCCC GCCGCCGCCG GCGCGGACCT CGCCGCCTAC CTCGCCGAAT TCAGCCGCGC CGCGAAGCCG GCGAGCCAAC GCCGGCTGAT CGCCGCGTGG CGGCGCTATT ACCGCCTGCT CCTCGCCAAC CGCGAGATCG CCGAGGACCC CACGCTGGCG ATCGACACCC CGCGCGCGGC CGAACGCTTT CCCAAGACCC TGAGCGAGCC CCAGGTCGAG GCCCTGCTCG CCGCTCCCGC GCTCGACACC CCGCAAGGCC TGCGCGACCG CTGCATGCTG GAGGTGCTCT ACGCCGCCGG CCTGCGGGTC TCCGAGCTGG TCGGCCTGAA GATCTTCGCG GTGGGGGTGA ATGAGGGCGT GGTGCGGGTC ATGGGCAAGG GCAGCAAGGA GCGCCTGGTG CCGCTCGGCG AGATCGCCGC CGACTGGCTG CAGCGCTACC TGGCCGAGGC ACGCCCGGTC CTGCTCGCCG GCCGCAGCTG CGACGAGATC TTCGTGACCC GCCTGGGGGC GGCGATGTCG CGCCAGATGT TCTGGCGCCT GATCAAGCAC TACGCCCTCG CCGCCGGCAT CGCGCCCGAG CGCATCTCGC CCCACACCCT GCGCCACGCC TTCGCCACCC ACCTGCTCAA CCACGGCGCC GACCTGCGCG TGGTGCAGCT GCTGCTCGGC CACGCCGACA TCTCGACCAC GCAGATCTAC ACCCACGTCG CGCGCGAGCG CCTCAAGCAG CTGCACGCGC GCCACCATCC GCGCGCATGA
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Protein sequence | MSGRAPAREA GLQPAHRAEL DRFADALWLE HGLARNTLAG YRSDLARFAA WLETRAQRLP AAAGADLAAY LAEFSRAAKP ASQRRLIAAW RRYYRLLLAN REIAEDPTLA IDTPRAAERF PKTLSEPQVE ALLAAPALDT PQGLRDRCML EVLYAAGLRV SELVGLKIFA VGVNEGVVRV MGKGSKERLV PLGEIAADWL QRYLAEARPV LLAGRSCDEI FVTRLGAAMS RQMFWRLIKH YALAAGIAPE RISPHTLRHA FATHLLNHGA DLRVVQLLLG HADISTTQIY THVARERLKQ LHARHHPRA
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