| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1152 |
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| Symbol | |
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| ID | 7084681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1275580 |
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| End bp | 1276647 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 643698167 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002354807 |
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| Protein GI | 217969573 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.162032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATGA CACGATCCGG CCGGTTGGCC TGGTTGGGCG CCGGTGTCCT CGTCCTGGCC
GCGGCCGGCG CCTGGCAGTT CCTGCGCCCC GCTCCGGACG ACGACAGCTT CGTGCGCGGC
AACGGCCGCA TCGAGGCCAC CGAGGTCGAT GTCGCCGCCA AGGCGCCCGG GCGGGTGGAC
GCGATCCTGG TTAACGAAGG CGACTTCGTC ACGCGCGACG ACGTGATCGC GCGCATGGAC
GTCAAGTCCC TGCAGGCCCA GCTCGCGCAG GCGCGTGCCG AAGTCGCCAA CGCCCACAGC
GCCCGCGAGA CCGCGCGCGC CCAGGTCGCC CAGCGCCAGG CCGACGTGAC CATGGCCGAG
GCGGTGCTGG TGCAGGGCCG CGCCGAATAC GACGTCGCCC GCCGCACCGC GGCGCGCTCG
CAGGCGCTGC TGAACGATCG TGCCACTTCC GCGCAGAAGG CCGACGACGA TGCCGCCCGT
GCGCGCACCG CCGAGGCCAG CATCCACGTC GCCGAGGCCC GCATCGTCGC CGCCCGCGCC
GGCGTGCGCG CCGCCGAGGC CCAGGTGCAG CAGGCCGAGG CCGCGATCCG CGCCGCCGAG
GCGGTGGTCG CCCGCCTCGA GACCGAGATC GCCGACGGCG AGCTGCGCGC CCCGCGCAGT
GGCCGCGTGC AGTACCGCGT GGTGCAGCCG GGCGAGGTGG TGGGCGGTGG CGGCAAGGTG
GTGAGCCTGG TCGACGTCGG CGATGTCTAC ATGACCTTCT TCCTGCCCGA GATGGCCGCC
GGCCGCGTGG CCCTCGGCAG CGAGGTGCGC ATCGTGCTCG ACGCCGCGCA GGCCTTCGTG
ATCCCGGCCA GGGTGTCCTA CGTCGCCAGC GTCGCCCAGT TCACGCCCAA GACCGTCGAA
ACGCAGAGCG AGCGCCAGAA GATGGTCTTC CGCGTCAAGG CACGCATCGA CCCCGAACTC
CTCGCCAGGT ACCCCGAACA GGTCAAGACC GGCCTGCCCG GCATGGCCCA CCTGCGCCTG
GACGCGCAGC GCGAGTGGCC GCCCGCGCTG CAGCCGAGGC TGCCGTGA
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| Protein sequence | MNMTRSGRLA WLGAGVLVLA AAGAWQFLRP APDDDSFVRG NGRIEATEVD VAAKAPGRVD
AILVNEGDFV TRDDVIARMD VKSLQAQLAQ ARAEVANAHS ARETARAQVA QRQADVTMAE
AVLVQGRAEY DVARRTAARS QALLNDRATS AQKADDDAAR ARTAEASIHV AEARIVAARA
GVRAAEAQVQ QAEAAIRAAE AVVARLETEI ADGELRAPRS GRVQYRVVQP GEVVGGGGKV
VSLVDVGDVY MTFFLPEMAA GRVALGSEVR IVLDAAQAFV IPARVSYVAS VAQFTPKTVE
TQSERQKMVF RVKARIDPEL LARYPEQVKT GLPGMAHLRL DAQREWPPAL QPRLP
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