Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1118 |
Symbol | |
ID | 7084647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1224471 |
End bp | 1225925 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643698133 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002354773 |
Protein GI | 217969539 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAGTT TGTTTAAAAA AGTATCAAAT GGCGTGCTGT GGGTAGCTTT TGGAACTGGT GCTCAGGTCT TCCTGCAGTT TCTATTGCTC GTTGCCCTAT CGCGCCTACT AACTCCATCG GAGTTTGGTC AAGTCACGGC AGCGCTGACA GTCGTGAGCC TCTCGACTAT TTTCTCTCAG ATGGGGGTCG GGCAAGCATT GGTCCAGTCG GAGTCAGTAA CCGTAGAGCA CAAGCGCGTA GCTTGGACGT TATCCATGCT GTCAGGTGCT TTTATTTGCT CCGGAATATT TTATATTTCT GATGAAATTC AATCCTTTTA TGCTATCGAT GGATTGGGCG ATCTGGTCAG AATCTTAGCC TTTGTTTTTC CAATCGTTGG CTTTGGGGTA GTCTCTGAAT CATCGCTGCA AAGAAGCCTT AGATTTAAAG AGCTCATGGG AGCTCGTGTC ACTTCGTATC TGTTTGGATA TGGGCTGGTG AGCTTAGTGC TCGCTTACGC TGGCCTTGGT GCGAGTGCTT TGGCTTACGG ATTTCTTGCG CAGGCCTTCT TGTTTTCGAG CTTGGTATAT ATCGCATCCT CGCACAGCTT ACGACCTTCT CTTCGCTTAG GGGTGCTGAA AGGGCTTGTT CGCTTCGGGT CGGGTCTAAC TTTAGCGAAA GTGGGTAACT ATCTAGCAAC GCAAGGCGAC TACGTTATCG TTGGGAAGCT GTTGGGGGTG ACATCGCTCG GTGTTTATAG CCGCGCCTAT CAGCTTCTTA TGTTGCCGAC AAATCTGATC GGCACTGTCT TGGAGAAGGT TCTTTTTCCG ACTCTTTCTT TGATTCAAGA AGATAAGAAG CAGTTGCAGA GTGTTTATGA GAAAGGTTTT GCTCTCGTGG CGTTGCTAAC CTTTCCGTTG ATGGCTTTTT CGATTGTTTT CGGTGATGAA ATTGTAAAGA CTATTCTGGG CTCACAATGG CACGATGTGG TAGCGCCTTT TCAGATTTTA ATTGCAGTTT TATTCTTTCG AACTGCCTAC AAGCTCAATG AATCACTCAT CAAAGCTGCA GGCAGAGTTT TTCAATTAGC TACGATTCAG TGGGTCTATG CCTCGGCTGT AGTTTCATTT TCAATTGCGG GGGCTTCGTG GGGGCTAAAC GGTGTTTCTG TAGGTGTCGG CCTCTCCGTC CTAGTTAACT ATTTTCTTAC GGCACACCTG CTGGGTAGAG TTATCCCCGT TTCTTGGGGG CAAAACATGA AGCTTCTAGT TCCAGGTCTT GCTACTGGTG GGGTTGTGCT TTGCACCTCC CTACTGGTTA AGATCATTGC CCACGGTGAT TTGGTGCCAC TTTTGATGCT AGTCGTGGGT GCTGGGCTTT CGGTTATATC TTTGGGCTGC CTTTCTTACG TCTTTCCGAA TATGTTCCTT GGGGCGGAGG GAGTATGGCT CGTAAAGAAG TTGAAGCGGT TTTGA
|
Protein sequence | MTSLFKKVSN GVLWVAFGTG AQVFLQFLLL VALSRLLTPS EFGQVTAALT VVSLSTIFSQ MGVGQALVQS ESVTVEHKRV AWTLSMLSGA FICSGIFYIS DEIQSFYAID GLGDLVRILA FVFPIVGFGV VSESSLQRSL RFKELMGARV TSYLFGYGLV SLVLAYAGLG ASALAYGFLA QAFLFSSLVY IASSHSLRPS LRLGVLKGLV RFGSGLTLAK VGNYLATQGD YVIVGKLLGV TSLGVYSRAY QLLMLPTNLI GTVLEKVLFP TLSLIQEDKK QLQSVYEKGF ALVALLTFPL MAFSIVFGDE IVKTILGSQW HDVVAPFQIL IAVLFFRTAY KLNESLIKAA GRVFQLATIQ WVYASAVVSF SIAGASWGLN GVSVGVGLSV LVNYFLTAHL LGRVIPVSWG QNMKLLVPGL ATGGVVLCTS LLVKIIAHGD LVPLLMLVVG AGLSVISLGC LSYVFPNMFL GAEGVWLVKK LKRF
|
| |