| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1116 |
|---|
| Symbol | |
|---|
| ID | 7084645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1220586 |
|---|
| End bp | 1221863 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643698131 |
|---|
| Product | nucleotide sugar dehydrogenase |
|---|
| Protein accession | YP_002354771 |
|---|
| Protein GI | 217969537 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.416504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACACCC TCGACACCCT CAAGCTCGCC ATCATCGGCC TCGGTTACGT CGGCCTGCCG
CTCGCGGTCG AATTCGCCAA GAAGCGCTCC GTCGTCGGCT TCGACATCAA CCAGGCCCGC
ATCGACGCCC TCAAGACCGG CCACGACGCC ACCCTCGAGG TCTCCGACGA AGAACTGCGC
GAAGCCACCG GCCTGCAATA CAGCGCCAAC CTGCAGGACC TCGCCGCCTG CAACACCTTC
ATCGTCACCG TCCCCACCCC CATCGACGAG CACAAGCAGC CCGACCTCAC CCCGCTGGTC
AAGGCCAGCG AGACCATCGG CAAGGTGCTC AAGAAGGGCG ACATCGTCAT CTACGAATCC
ACGGTCTACC CCGGCGCCAC TGAGGAAGAC TGCGTCCCGG TGCTGGAGAA GTTTTCCGGC
CTCAAATTCA ACGTCGACTT CTACGCCGGC TACAGCCCCG AGCGCATCAA CCCGGGCGAC
AAGGAACACC GCGTCTCCAC CATCAAGAAG GTCACCTCCG GCTCCACCCC CGAAGTGGCC
GAGCTGGTCG ACCAGCTCTA CCGCCAGATC ATCGTCGTCG GCACCCACAA GGCCGAAAGC
ATCAAGGTGG CCGAAGCCGC CAAGGTCATC GAGAACACCC AGCGCGACGT CAACATCGCC
CTCATCAACG AGCTGGCCAT CATCTTCAAC AAGATGGGCA TCGACACCGA GGCCGTGCTG
CAGGCCGCCG GCAGCAAGTG GAACTTCCTG CCCTTCCGTC CGGGCCTGGT CGGCGGCCAC
TGCATCGGCG TGGACCCCTA CTACCTCACC CACAAGGCGC AGTCCATCGG CTACCACCCC
GAGATCATCC TCGCCGGCCG CCGCCTCAAC GACGGCATGG GCGCCTACGT GGTGTCGCAG
CTCGTCAAGG CCATGCTCAA GCGCCGCATC ACCGTCGAAG GCGCGCGCGT GCTGGTCATG
GGCCTCACCT TCAAGGAAAA CTGCCCGGAC CTGCGCAACA CCCGCATCGT CGACATCGTC
AAGGAACTCG GCGAGTACAA CATCCAGGCC GACGTGTACG ACCCGTGGGT GGACGTGGCC
GAGGCCCAGC ACGAATACGG GCTCACTCCG ATCGACAAGC CGGAGCCCGG CGCCTACGAC
GCGATCATCG TCGGCGTGGC GCATCAGCAG TTCAAGGACA TGGGAGCCGA GGCCATCCGC
GCGCTCGGCA AGCCGGAACA TGTGGTGTAT GACCTCAAGT ATGTGATGCC GAGGAATGCG
GCGGATCTGC GACTTTAA
|
|---|
| Protein sequence | MHTLDTLKLA IIGLGYVGLP LAVEFAKKRS VVGFDINQAR IDALKTGHDA TLEVSDEELR
EATGLQYSAN LQDLAACNTF IVTVPTPIDE HKQPDLTPLV KASETIGKVL KKGDIVIYES
TVYPGATEED CVPVLEKFSG LKFNVDFYAG YSPERINPGD KEHRVSTIKK VTSGSTPEVA
ELVDQLYRQI IVVGTHKAES IKVAEAAKVI ENTQRDVNIA LINELAIIFN KMGIDTEAVL
QAAGSKWNFL PFRPGLVGGH CIGVDPYYLT HKAQSIGYHP EIILAGRRLN DGMGAYVVSQ
LVKAMLKRRI TVEGARVLVM GLTFKENCPD LRNTRIVDIV KELGEYNIQA DVYDPWVDVA
EAQHEYGLTP IDKPEPGAYD AIIVGVAHQQ FKDMGAEAIR ALGKPEHVVY DLKYVMPRNA
ADLRL
|
|---|
| |