| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1106 |
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| Symbol | |
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| ID | 7084635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1206304 |
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| End bp | 1207008 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643698121 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002354761 |
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| Protein GI | 217969527 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0733925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC GCGGCCTGTG CTCGCGGCGC GAGGCCGACG AGTTCATCGA GCGCGGCTGG
GTCTTCGTCG ATGGCCGGCG CGTGTCGGAG CTCGGCGTGC GCGTCGGCCA GGACGCCCGC
GTCACCCTCG CCCCCGAGGC CACGCGCACC CAGCAGCAGC GCGCCACCAT CCTGCTGCAC
AAGCCGGTGG GCTATGTCTC CGGGCAGCCC GAGCCGGGCT ATTCCCCCGC GGTGAGCCTG
ATCGGCCCCG ACAACCAGGC CGACCGCGAC GTCGCCCAGC GCTTCCACCC CAGCCACCTG
AAGAACCTCG CCCCCGCGGG CCGGCTCGAC ATCGACTCCA CCGGCCTGCT GGTCCTCACC
CAGGACGGCC GCATCGCCCG CCAGCTCATC GGCGAGGACT CGAAGGTCGA AAAGGAATAC
ATCGTCCGCG TCGAGGGCAC GCTGGCCGAG AACGGGCTGG CGCTGCTCAA CCACGGGCTG
TGGCTGGACG ACCGCCCGCT GCGCCCGGCC GAGGTCGAAT GGATCAACGA CGACCAGCTG
CGCTTCGTGC TGCGCGAGGG CCGCAAACGC CAGATCCGCC GCATGTGCGA GCTGGTGGGG
CTGAAGGTGG TGGGCCTCAA GCGCGTCCGC ATCGGCCACG TGAAGCTCGG CGACCTGCCG
CTCGGGCAGT GGCGCTTCCT GCGCGAGGAC GAGCGCTTCG GATGA
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| Protein sequence | MAERGLCSRR EADEFIERGW VFVDGRRVSE LGVRVGQDAR VTLAPEATRT QQQRATILLH
KPVGYVSGQP EPGYSPAVSL IGPDNQADRD VAQRFHPSHL KNLAPAGRLD IDSTGLLVLT
QDGRIARQLI GEDSKVEKEY IVRVEGTLAE NGLALLNHGL WLDDRPLRPA EVEWINDDQL
RFVLREGRKR QIRRMCELVG LKVVGLKRVR IGHVKLGDLP LGQWRFLRED ERFG
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