Gene Tmz1t_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_1099 
Symbol 
ID7084628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp1198934 
End bp1199734 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content71% 
IMG OID643698114 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002354754 
Protein GI217969520 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00311315 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCGA AGAAGACCGA ATCCGCCCCC AGTGCCGAAG GCAAGACCTC GATCCAGGTC 
ATCGAACGCA TGATGAAGCT GCTCGACGTG CTGGCCGAAC ATGCCGATCC GGTCCAGCTC
AAGCAGCTCG CGATCGAGAC CGGGCTGCAT CCGTCGACCG CGCACCGCAT CCTCGGCGCG
ATGACGCACA GCGGCTTTGT CGAGCGCTCC GAGGCCGGCG CCTACCGGCT CGGGATCCGC
CTGCTCGAGC TCGGCAGCCT GGTGAAGTCG CGCATCTCGC TGCGCGAGAC CGCCATGCCC
TACATGCTCA AGCTGCACGC CGCCACCGGC GAGAGCGTGA ACCTGGGCGT GCGCGCCGGC
GACGAGATCG TGTATGTCGA GCGCACCTCG AGCGGGCGCG CCTCGGTGCG CGTGGTGCAC
ATCGTGGGCG CGCGCGCGCC GCTGCACACC ACCGCCACCG GCAAGCTCTT CCTGGTCGAG
GACGGCCTCG AGCGCATCCG CGACTACGCC CGCCGCACCG CCCTGCCCGC CTCCACCCCG
GCCTCGATCA CCGCGCTGCC GGCGCTGGAG AAGGAGCTCG ACCGCGTGCG CCGCCACGGC
GTGGCCTTCG ACCTCGACGA GGTCGAGGCC GGCGTGCGCT GCATCGCCGC GGGCATCCGC
GACGACAGCG GCGAGCTGAT CGCCGGCCTG TCGCTATCGA CCCCTTCCGA ACGCTTCAAC
CCCGACTGGG CCCCACTGGT GCGCGAGACC GCCGACGAGA TCTCCCGCGC CCTCGGCCAC
CTTCCGCCAA AGACGGGATA A
 
Protein sequence
MQPKKTESAP SAEGKTSIQV IERMMKLLDV LAEHADPVQL KQLAIETGLH PSTAHRILGA 
MTHSGFVERS EAGAYRLGIR LLELGSLVKS RISLRETAMP YMLKLHAATG ESVNLGVRAG
DEIVYVERTS SGRASVRVVH IVGARAPLHT TATGKLFLVE DGLERIRDYA RRTALPASTP
ASITALPALE KELDRVRRHG VAFDLDEVEA GVRCIAAGIR DDSGELIAGL SLSTPSERFN
PDWAPLVRET ADEISRALGH LPPKTG