| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1096 |
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| Symbol | |
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| ID | 7084625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1195813 |
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| End bp | 1197687 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643698112 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_002354752 |
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| Protein GI | 217969518 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.12158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGCTG CCCTGCCCGA AACCGCCCCG AGCCGCCTGT TCCTGTCCGG CAACGAGGCC
GTGGCGCTCG CCGTGCGCGA CGCCGGCTGC CGCGTCGCCG CCGCCTATCC GGGCACGCCG
GCGACCGAGA TCCTCGAGGA GCTGTCGCGC TTTCCCGACC TGTACACCGA ATGGTCGGTG
AACGAGAAGG TCTCGCTCGA GGTCGCGCTC GGCGCCTCGA TGGTGGGCGC GCGCGCCTTC
TGCGCGATGA AGCACGTCGG CCTCAACGTC GCCGCCGACG CGCTGATGAC CATGACCGTC
ACCGGCACCG AAGGCGGCCT CGTGATCGCG GTCGCCGACG ACGTCGGCAT GTCCTCGTCG
CAGAACGAGC AGGACTCGCG CTTCTGGGCG CGCTTCGCCC ACCTGCCGCT GTTCGAGCCC
GCCGACGCGC AGGAGTCCTA CGACATGGCG CGCGAGGCCT TCGCGGTGTC CGAGCGCTTC
CGCTGTCCGG CGATCGTGCG CCTGACCACC CGCATCTGCC ACGTCAAGGG CCGCGTCGTC
GCGGGCGAGC GCGAGGCCCA CGAGCCCGCC GGCTTCGTCA AGGATCCGCA GCGCTGGGTC
ATGGTGCCCG GCCACGCCAA GCCGCGCGTG GCGCTGATGT ACGAGCGCGA GGAGGCCTTG
CGCGCCGCCT CCGCGCAGAG CCCGTTCAAC CTGCTCGTCG AGGGCAGCGA CCGCCGCATC
GGCTTCGTGA CCTCGGGCCC GGCCTACATG CACGTGCGCG AGACCTTCCC CGACGCGCCG
GTGTTCAAGC TCGGCCAGTC CTACCCGCTG CCGCTCGAGC GCCTGCGCGA GTTCGCCGCC
GGCGTCGACC AGCTCCTGGT GGTCGAAGAG ACCGAGCCCC TGGTCGAAAG CGAGCTGCGC
GCCGGCGGCA TCGCCTGCAC GGGCAAGGAC GTGCTGCCGC GCGTCGGCGA GCTCTCGCCC
GACCGCCTGC GCCCGGCCGT GGCCCGCCTG CGCGGCGAGG AAATCCCAGT CACCGCGCAG
CCCCGCCTGG TGCCGCAGCA GGTCTTCCCG CGCCCGCCCA CCATGTGCGT CGCCTGTCCG
CACCTGGGCA TCTATTACAC CCTCGCGCAG CTGCGCAACC TCACCATCTC GGGCGACATC
GGCTGCTACA CCCTGGGCGC CGGCCACCCC TGGAACGCGC TCGACACCTG CATCTCCATG
GGCGCCTCGA TGGGCGTGGC GCTCGGCATG GACAAGGGCC GCGGCCAGGC CGACGCCAAG
AAGGCGGTGA TCGCCGTGAT CGGCGACTCC ACCTTCATGC ACATGGGCAT GCAGGGCCTG
CTCGACATCA CCTGGAACCG CGGCAACGTC ACCGTGCTGC TGCTCGACAA CCGCGCGGTG
GGCATGACCG GCGGCCAGGA CAACCCCGGC ACCGGCCGCG ACATCCACGG CGAGAGCGCG
CAGCGGGTCG ACTTCGCCAA GCTGTGCGAG GCGCTCGGCG TCAAGAAGGA GCGCATCCAC
ACGCTCGACC CCTACGAGCT GCCCACGCTG TTCAAGACCC TGCGCGAGGA GATCAAGATC
CCCGAGCCCT CGGTGATCAT CACCGACCGG CCCTGCGTGC TGATCGACCA CTACAAGCCC
ACGCAGCCCT ACAAGGTGAT CGCGGACAAG TGCACCGGCT GCGCCAACTG CATCGACGTC
GGCTGCCCGG CGATCCACGT CACCCGGCGC GAGACCCAGG TCAAGCCCTC GGGCAAGGAA
GTCGAGCTCG CCTTCGTGCG CATCGAGACC TCCGCCTGCA CCGGCTGCGG CCTGTGCGTG
CAGCCGTGTG CGCCCGAAGC CATCGTCCAT GCCCTGCCGG AGCATCCGGT GAAGTTCCTG
CACGCCAAGG TCTGA
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| Protein sequence | MGAALPETAP SRLFLSGNEA VALAVRDAGC RVAAAYPGTP ATEILEELSR FPDLYTEWSV
NEKVSLEVAL GASMVGARAF CAMKHVGLNV AADALMTMTV TGTEGGLVIA VADDVGMSSS
QNEQDSRFWA RFAHLPLFEP ADAQESYDMA REAFAVSERF RCPAIVRLTT RICHVKGRVV
AGEREAHEPA GFVKDPQRWV MVPGHAKPRV ALMYEREEAL RAASAQSPFN LLVEGSDRRI
GFVTSGPAYM HVRETFPDAP VFKLGQSYPL PLERLREFAA GVDQLLVVEE TEPLVESELR
AGGIACTGKD VLPRVGELSP DRLRPAVARL RGEEIPVTAQ PRLVPQQVFP RPPTMCVACP
HLGIYYTLAQ LRNLTISGDI GCYTLGAGHP WNALDTCISM GASMGVALGM DKGRGQADAK
KAVIAVIGDS TFMHMGMQGL LDITWNRGNV TVLLLDNRAV GMTGGQDNPG TGRDIHGESA
QRVDFAKLCE ALGVKKERIH TLDPYELPTL FKTLREEIKI PEPSVIITDR PCVLIDHYKP
TQPYKVIADK CTGCANCIDV GCPAIHVTRR ETQVKPSGKE VELAFVRIET SACTGCGLCV
QPCAPEAIVH ALPEHPVKFL HAKV
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