| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1087 |
|---|
| Symbol | |
|---|
| ID | 7084616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1183891 |
|---|
| End bp | 1184418 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643698103 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_002354743 |
|---|
| Protein GI | 217969509 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.243154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC TGACCCCACG GTGTTCCAAC CACGACGAGC GCCCAGCGGG CGAGCGCGTC
CGCCTCATCG TCGTCCACGC CATCAGCCTC CCTCCCGACG AGTTCGGCGG TCCCGGCGTC
GAGCAACTCT TCACCAACAC GCTGGATCCC GACGCCCACC CCTACTACGC GACCATCCAC
CACCTGCGCG TGTCGGCGCA CTACTTCATC CGTCGCGACG GACAGACGCT GTGCTTCGTC
GACCCCGATC GCCGCGCCTG GCATGCCGGG GTGTCGTGCT GGAACGGGCG CGAGCGCTGC
AACGACTTCT CCATCGGCAT CGAGCTCGAG GGTTGCGACA CGATGCCTTT CGAGCCCGCG
CAGTACGAGC GTCTGGCGGC GCTGATCGTC GCGCTGGAGC GGCGCTATCC GATCGAGGCG
GTGGTGGGAC ACTCCGACAT CGCGCCCGGT CGCAAGACCG ATCCGGGGCC TTTTTTCGAC
TGGATGCGCC TTGATGCGTT GCGCGAACAG CGCCGCGCAA GCTGCTGA
|
|---|
| Protein sequence | MKDLTPRCSN HDERPAGERV RLIVVHAISL PPDEFGGPGV EQLFTNTLDP DAHPYYATIH
HLRVSAHYFI RRDGQTLCFV DPDRRAWHAG VSCWNGRERC NDFSIGIELE GCDTMPFEPA
QYERLAALIV ALERRYPIEA VVGHSDIAPG RKTDPGPFFD WMRLDALREQ RRASC
|
|---|
| |