| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1084 |
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| Symbol | |
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| ID | 7084613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 1182132 |
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| End bp | 1183244 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643698100 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_002354740 |
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| Protein GI | 217969506 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0141489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAAGA ACTTGATCGC CCTTGCCGTT GCCGGGCTCG CCGCCCTGCC GGCCTTCGCG
CAGTCCAATG TGACGATCTA CGGCCTCGTC GACATGGGCT ACAAGTGGTC GGGCGACAAT
ATGGACGATC GCGTGTCCAG CCGGTCGGCG CTCGATTCGG GCATGAGTGC AGGAAGCCGC
CTCGGCTTCA AGGGCACCGA AGATCTGGGT AACGGCATGA AGGCGGGCTT CGTGCTCGAG
CAGGGCCTCA ATCTCGATAC CGGGACGCTC GGCCAGGGCG GTCGCGCTTT CGGGCGCCAG
TCCTTCGTCA GCCTTGGCGG CGGCTTCGGG ACCGTCGCGC TCGGGCGCCA GTACCCGGCC
GGCTACCTGC TGACGGCGAC GGTCGACCCC TTCGGCAGCG GCACCGCGGG GCAGTACAAC
AGCGTCTACC TGACCGAATA CCGCTGGGAT AACGCCGTGA CTTACGTCTC CCCGACCTTG
GGCGGGTTCT CGATTTCCGC GGCCTTCACG ATGAACGTCA ATGGCGAGGA GTCGCCGGAC
AACCGTGGAG AGGGGGACGT CGGGGACATC CATGCGTGGT CCGTCGTGCC GCAATACGTG
AACGGCCCCC TGTTTGCGGG CATCCACCTC CAGGAGATGC GTGCCAAGTC CACCGGCCTG
TACGACGGCG AGACGGTGCG CGTGTATGAC GTCGCCGGCA CCTACGATTT CGGTGTCGCC
AAGCTCGCCG CCTCGTACGG GCTGCGTCGC GCCAGCGCTG CCGATTTCAG CCCCGATTCG
GCGGCCGTGA ACGGAAAGGA CTCCCGCCAG TGGTTCGTCG GCGTGACCGT GCCGGTCGGC
GCGGCCGGCA CCGTGCGCGC CTCCTACGTG GCGCGCGAGA CCGAAGTCGT TTCCGGCGGG
CCCGACGCGA AAGTCAGCCA GTGGGCGCTC GGCTACGAGC ATGCACTGTC GAAACGCACT
GCCCTCTACG CGGTGTATGC GGACATCGAC AACAACGAAG CCGCGAAGGA CAGCGGCCTG
TATGCCTCGA TCGGCGATGC GATGGCTGGC GGCGTCGCGG GCGGGGACGG CTACCAGAGG
GGCGTGAACC TGGGCCTGCG GCATAGCTTC TGA
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| Protein sequence | MQKNLIALAV AGLAALPAFA QSNVTIYGLV DMGYKWSGDN MDDRVSSRSA LDSGMSAGSR
LGFKGTEDLG NGMKAGFVLE QGLNLDTGTL GQGGRAFGRQ SFVSLGGGFG TVALGRQYPA
GYLLTATVDP FGSGTAGQYN SVYLTEYRWD NAVTYVSPTL GGFSISAAFT MNVNGEESPD
NRGEGDVGDI HAWSVVPQYV NGPLFAGIHL QEMRAKSTGL YDGETVRVYD VAGTYDFGVA
KLAASYGLRR ASAADFSPDS AAVNGKDSRQ WFVGVTVPVG AAGTVRASYV ARETEVVSGG
PDAKVSQWAL GYEHALSKRT ALYAVYADID NNEAAKDSGL YASIGDAMAG GVAGGDGYQR
GVNLGLRHSF
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