Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_1059 |
Symbol | |
ID | 7084043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 1160885 |
End bp | 1161787 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643698077 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002354717 |
Protein GI | 217969483 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.261261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCAC CGGCTGCCCG CCGCGGCGGG TTCGCGCCGC TCAACACGCC GATCCGCGAA TGGGCGGGGC GGCGGGTGTG GATCGTCGGT GCGTCCTCGG GCATCGGCGA GGCGCTCGCG CTCGCGCTCG CCCGCAGGGG CGCGCGCCTC GCGCTCTCCG CGCGCGGGCG CGAGCGCCTC GAGGCGGTGT GCGCGGCCTG CGACGCGGCT GCCGGCGCGG GCCCGACCGC CGGGGACGCG GGCGCGCTCG CGAATGCGGC CGTCGAGCCT GCGCACCGCG CCGAGTCGCC CGCTTCCGCC GGAGTGCTCG CGCTTGCGCT CGACTTGTCG CGCGCGGGCG AGATCGAACG GGCGCGCGAC CGGCTGCTCG CCGCCTGGGG CGGCATCGAT CTCGTGGTCT TCAACGCCGG CACCTACCGC CCGTTGCGCG CCTGGGAGCT CACTGCGGAG GCCGTGCGCG AGACGCTGGA GACCAACCTC GTCGGCACCA TGAGCGGCAC CGCGGCAGTC CTGCCGACCC TGCTCGCGCA GGGTCACGGC GCCATCGCGC TGGTCGGCAG CGTCGCCGGC TACGGCGGAC TGCCGAAGGC GCTCGTCTAC GGCCCGTCCA AGGCGGCGCT GATCAACTTC GCCGAGGTCC TCCACCTCGA CCTGTCGCCG CGCGGCATCG GCGTCTTCCT GATCGACCCC GGCTTCGTCG CCACGCCGCT GACCGCGCAG AACGACTTCG CCATGCCCGC GCTGCAGACG CCCGAGCAGG CGGCCGCTGC GATCGTCGAC GGCTTCGCGC GCGGCGACTT CGAGATCCAC TTCCCGAAGC GCTTCACGCG CGCGCTCAAG CTCCTGCAGC TGCTGCCGCG GCCGCTGTAT TTCGCGCTGA TCCGCCGCGC AACGGGCCTG TAG
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Protein sequence | MTAPAARRGG FAPLNTPIRE WAGRRVWIVG ASSGIGEALA LALARRGARL ALSARGRERL EAVCAACDAA AGAGPTAGDA GALANAAVEP AHRAESPASA GVLALALDLS RAGEIERARD RLLAAWGGID LVVFNAGTYR PLRAWELTAE AVRETLETNL VGTMSGTAAV LPTLLAQGHG AIALVGSVAG YGGLPKALVY GPSKAALINF AEVLHLDLSP RGIGVFLIDP GFVATPLTAQ NDFAMPALQT PEQAAAAIVD GFARGDFEIH FPKRFTRALK LLQLLPRPLY FALIRRATGL
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