| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1027 |
|---|
| Symbol | |
|---|
| ID | 7084011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 1122631 |
|---|
| End bp | 1123584 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643698045 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002354685 |
|---|
| Protein GI | 217969451 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.922112 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGCCTA GATTGCTACG CTATTTCGTT GCAGTCGCGG AAGAGCTGCA TCTCGCCCGC
GCGGCCGAGC GTCTCGGGAT CGAGCAATCT CCCGTATCGC GAGCAATGCG CGACCTGGAA
AGCCAGCTTG GCGTGCAGTT GTTCGACCGC AGCACCCGCC TGACGCGGCT GACCTGGGCC
GGCCAGGTGT TCCTAGGCGA ATGCCGACGC GTGATGGCCA CCGTGGAGCA GGCAGTCAAG
AGTGCCAAGG CGGCGGCACA GGGCTACCAG GGCCATCTGC GCATCGCGAT CTGCGACGGC
CTGGCGCAGC CCCGCATCGC CACCTTGCTG GCACGCAGCC GCGAGGAGGA GCCCGAGATG
GAGATTCGCG TCTTCGAGCT GCCGTTCGCG CAGCAGCTCA AGACGCTGCA CGACGATCTG
CTGGACATCG GCTTTGCGTT GTCAAACGCG GTACATGATG GCCTCGTCGC CGAGCCGGTG
TGGACCGATC CGCTGTCGGT GATCGTGCCC GCACGCCACC CCTTGCTGGC ACACGTGCAG
GTGCCGCTGG CCGAAGCCCT GAAGTTCCCG CTGGTTCTGT GCCATCCCGA ATCGGGATCG
GGCTGCCGCC ATCAGATTCA AGCGCTGCTG CAGGACGCAG GCACGCCGCT CAAGCTGGTC
GATGAAGTGA CCAGCCTGGG CGTGATGCTG ACCCTGGTCG GTGCCGGCTA CGGCATCGGC
TTCGCCATCG CCTCGCAGGT GCAGACGCTA CAGCGCCCGG ACATCTCCAT TCGTCCCTTG
GCCGGCAGCC CACCGGTGCT CTCTACCTAC CTGCTGCGCC GCCGGGGCGA ACCCTCGGAG
CCCATGAAGC GGTTCATCGA GCGGGCGAAA GGCGGGCGGG ACCGCGCCGC CGGAGGAGTG
ACCACCCCCA GAGAAGGGTG CCAGCGTCGA TGGGATGCGC GTAAGGTGGT GTGA
|
|---|
| Protein sequence | MEPRLLRYFV AVAEELHLAR AAERLGIEQS PVSRAMRDLE SQLGVQLFDR STRLTRLTWA
GQVFLGECRR VMATVEQAVK SAKAAAQGYQ GHLRIAICDG LAQPRIATLL ARSREEEPEM
EIRVFELPFA QQLKTLHDDL LDIGFALSNA VHDGLVAEPV WTDPLSVIVP ARHPLLAHVQ
VPLAEALKFP LVLCHPESGS GCRHQIQALL QDAGTPLKLV DEVTSLGVML TLVGAGYGIG
FAIASQVQTL QRPDISIRPL AGSPPVLSTY LLRRRGEPSE PMKRFIERAK GGRDRAAGGV
TTPREGCQRR WDARKVV
|
|---|
| |