| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_1016 |
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| Symbol | |
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| ID | 7084000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | - |
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| Start bp | 1111067 |
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| End bp | 1112605 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643698035 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002354675 |
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| Protein GI | 217969441 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCCA AGACCCGCAC TCCCTTTCTT CGCGCAACCG TCACCGGCCT GACCCCTGGG
CGCGTGCGTC CGGTCGCGCT GGCCCTGTCG TGCGTGCTGC TGACTGCCTG CGCAACCGTG
GGCCCCGACT ACCGCGAGCC GCCGCCGGTC GACGTCGGCA GCGGCTGGAC CTTGCCGTTG
GCAAGTGAAT CCCAGTCCGC AGACTTGAGC CAATGGTGGT CTGCACTGGA CGATCCAGTC
CTCGATCGCC TGATGGCCAC AGCGCTGGCA CTGAACCTGG ATCTGCGCCA GGCTGCGGCA
CGCATCGATG AGGCACGCGC CCTGCGCGAA CGTGTGGCCG GCGAGGCACT GCCCACCGCC
GCCGCAGGCG CGAGCGTCAA CCGGCGCCGT CAAAGCGAGA ACGGCCCCTT GCCCGTAGGC
TCCATCCCCG GTCTTGACGC CACGCAGACC ATCTACGACG CGGGCTTCGA CGCGGCCTGG
GAGGCCGACT TGTTCGGGGC CAAGCGGCGC GCCCTGGAAG GCGCCAGCGC CCGCCTGCGG
GCGACCGAAG CCGAGGCACA GGGCGTACGC ATGCGTATCG TGGCCGAGGT CGCGCGCACC
TGGTTCACCG CCGTCGGCGC CCGCTACGAG TTGCACGCAC AACGCGCCAC GCTGGATACG
CTGCAGCAGA CCTTTGAATT GGTGCGCCTG CGGCACGCGC TGGGCGACGC GTCGGCCGCC
GACGTGGAGG CGGCGTACGC CCAATGGACA GCAGTCAACG CGCTCATCCC GGATATCCAG
GCGCGCCAGC GCACCGCGGT GCTCAGCCTG GGCGTGCTGC TGGGCGCACC GCCGGAGCGG
GAGCTGGCAC TGCTTGATGG CCCCTTGACG CCGAGCACGC TGCGGGCACT GCCGGTGGGC
GAGCGCGCAG ATATGCTGCG CCGACGTCCT GACGTGCTGG CTGCGGAACG TCGCCTCGCA
GCGAGTTCTG CCGACATCGG CGTGGCCACG GCCGAGTTGT TCCCCAAACT CTCCATCGGT
GTCGGCGGCG GGTTTCAGGC GCTCAGTACG GGCGATTGGT TCGATGCATC CAGCTCGCGT
TTTTCCATCC TGCCGCTGAT TTCCTGGCGC CTGTTCGACG GTGGCCGTGT GCGAGCCGAA
ATTCGGGCAC GCGAGGCGGC CGAGCGGCAG GCCGCGCTGG CCTACGAGCA GGCCGTGCTG
ACGGCGCTGG GCGACGCCGA GCGCGCGCTG GGCGACTACC ACGGCGGGCT GGACACACTG
GAACGCCGCG GCATGGCACT GGATGCCGCG CGCACAACCT ACGGCCACAC CAGGACGCGC
TACGCGGCGG GCGACATCGC GCTGGTCGAA CTGCTGGCTG CCCAGCGCAG CCTGCATGAG
GCCGAAACCG CAGCCGCGCG GGCACATACC AACGCCGCCG TGCAATTGGT GGCGCTGTAC
AAGGCCCTTG GCGGTGGCTG GGAAGTATCC ACGACGGCAT CGACCGCAAC CCATCCGCTG
CGGGACGCTG CCGCCCCCGT CGCGTTTTCA AGCCGCTGA
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| Protein sequence | MKSKTRTPFL RATVTGLTPG RVRPVALALS CVLLTACATV GPDYREPPPV DVGSGWTLPL
ASESQSADLS QWWSALDDPV LDRLMATALA LNLDLRQAAA RIDEARALRE RVAGEALPTA
AAGASVNRRR QSENGPLPVG SIPGLDATQT IYDAGFDAAW EADLFGAKRR ALEGASARLR
ATEAEAQGVR MRIVAEVART WFTAVGARYE LHAQRATLDT LQQTFELVRL RHALGDASAA
DVEAAYAQWT AVNALIPDIQ ARQRTAVLSL GVLLGAPPER ELALLDGPLT PSTLRALPVG
ERADMLRRRP DVLAAERRLA ASSADIGVAT AELFPKLSIG VGGGFQALST GDWFDASSSR
FSILPLISWR LFDGGRVRAE IRAREAAERQ AALAYEQAVL TALGDAERAL GDYHGGLDTL
ERRGMALDAA RTTYGHTRTR YAAGDIALVE LLAAQRSLHE AETAAARAHT NAAVQLVALY
KALGGGWEVS TTASTATHPL RDAAAPVAFS SR
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