Gene Tmz1t_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0888 
Symbol 
ID7084746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp983356 
End bp984177 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID643697911 
ProductABC transporter related 
Protein accessionYP_002354551 
Protein GI217969317 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00820574 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTGT CCGCCCCACA TCCCTCCCCG CTGGTTTCGC TGCGCGACGT GCGCTTCGCC 
TATGGCGAGC GCGAGGTGCT GCGCGGCATC GACCTGAGCG TGCATCGCGG CCAGGTGGTC
GCCATCATGG GCGGCAGCGG CTGCGGCAAG ACCACGCTGC TGCGCCTGAT CGGCGGGCAA
CTGCGCGCGA CCGGCGGCAC CGTGGAGGTG GAGGGGCGCG ACGTGGCGCG GCTGTCGGGC
AGCGAGCTCT ACGCGCTGCG TCGGCGCATG GGCATGCTGT TCCAGTTCGG CGCGCTGTTC
ACCGACATGA GCGTGTTCGA CAACGTGGCC TTCCCGCTGC GCGAGCACAC CGACCTGCCC
GCGGGCATGG TGCGCGACCT GGTGCTGATG AAGCTGCAGG CGGTGGGGCT GCGCGGCGCG
GCGAAGCTGC ATCCCAACGA GCTCTCGGGC GGCATGGCGC GGCGGGTGGC GCTGGCGCGC
GCGGTGGCGC TCGACCCGAT GCTGATCCTG TACGACGAGC CCTTCGCCGG CCTCGACCCG
ATCTCGCTCG GCATCATCGG CCAGCTCATC CGCAAGCTCA ACGACGCGCT CGGCGCGAGC
TCGGTGATGG TGACCCACGA CGTGCACGAG TCGCTGGCGA TCGTGGACTA CATCTACTTC
GTCTCCGACG GCCGCATCGT GGCGCAGGGC ACGCCGGACG AGATCCGCGC CTCGAGGGAT
CCCTTCGTGC ATCAGTTCGT CCACGCCGAG GCCGACGGGC CGGTGCCCTT CCACTATCCG
GCCGAGCCGA TCGAGCGCCT GCTCGGCGGG GAGGGCGCAT GA
 
Protein sequence
MTVSAPHPSP LVSLRDVRFA YGEREVLRGI DLSVHRGQVV AIMGGSGCGK TTLLRLIGGQ 
LRATGGTVEV EGRDVARLSG SELYALRRRM GMLFQFGALF TDMSVFDNVA FPLREHTDLP
AGMVRDLVLM KLQAVGLRGA AKLHPNELSG GMARRVALAR AVALDPMLIL YDEPFAGLDP
ISLGIIGQLI RKLNDALGAS SVMVTHDVHE SLAIVDYIYF VSDGRIVAQG TPDEIRASRD
PFVHQFVHAE ADGPVPFHYP AEPIERLLGG EGA