| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0863 |
|---|
| Symbol | |
|---|
| ID | 7084720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 954703 |
|---|
| End bp | 956511 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643697885 |
|---|
| Product | ABC transporter domain protein |
|---|
| Protein accession | YP_002354526 |
|---|
| Protein GI | 217969292 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.207874 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCA CCCACGCCGC CTCCCTTCCC AAGCAGCCCC ACCGCCGGCC GCCCCACCGT
GACGGCGGGC GGCGCTTCCT GCTGCTGGCG GGGGGCTACT GGAACTGTGC GCGCAAGTGG
CAGGTGCGCG GGACGGTGCT GGCGCTGGCG CTGCTGACGA TGGCGCAGGT CGGGCTGGCG
ATCTGGGTGA GCTACTGGAA CCGCGACCTC TTCGACGCAC TCGAGGAGCG TGCGCTGTCC
GAGCTGATGA AGCTGGTCGG GGTCTTCGTG CTGATCTTCG CGCTCACCAT GGGGGTGACC
GCGCTGCACA TGCACGTCAA GCGCCGGCTG CAGCTCGACT GGCGGCGCTG GCTCACCGAC
CTGCTGCTCG AGCACTGGCT GGCGCACGGC CACCTGTACC GCCTGCAGTT CACCGCCGGC
GAGCACGACA ACCCCGACGG CCGCATCGCC GAGGACATCC GCATCGCCAC CGACGTGGCG
GTCTCGCTCG CCCACTCGCT GCTGTTCGCG CTGCTGATCC TGGGCAGCTT CATCGACATC
CTGCTGCGCG TCTCGGGCAG CGCGCCGCTG CCGGGGACCT CGATCGCGGT GCACGGCTAC
ATGGTGCTCG CCGCCTTCCT GTATGCGGGC GTGGGCGCGG CGCTCGGGCT CATGCTCGGT
CGCCCGCTGA TCCGCGCCAC CAACCGCCTG CAGACCGTCG AGGCCAACCT GCGCTTCGGG
CTGGCGCGCG CGCGCGAGCA CGCCGAGCCG ATCGCGATGA TGCACGGCGA GCCGCACGAG
CGCCGCGAGG CGGCGCGTCT GTTCGACGAC GTCGGGCGGG GCTGGAACCG GCAGACCCTG
GCCTACCTCG GCATCGTGTC CTTCTCCACC GGCTACGGCA CCCTGCTGCC GGTGTTCCCC
ATCCTGATCG CCGCGCCGCA GTACATCGCC GGGGCGATGA CGCTGGGCGT GCTGATGCAG
GCGGCACAGG CCTTCCAGCG CCTGACCACG GCGCTGTCGT GGCCGATCGA CAACCTCGGC
GAGCTGGCGC GCTGCCGCGC CTCGATCGAC CGCGTCGCCA GCCTCTACGA GGACATGCTC
GCGCTCGAGC GCGCCGAAGC CCGCAGCCGC GGCCGCGAGC GCATCGCGGT GTGCAGCTCG
CCCCACCCCG AGCTCGAGCT GCGCCAACTG CGCCTGCAGA CACCGTCGGG CGAGATCCTC
CTCGACGACT TCGACCTGCG CGTGCGCCGC GGCGAGCGCG TGCTGATCTG CGGCGACCCT
GCGGTCACCG TGAGCCTGTT CAAGGCGGTG GCCGGGCTGT GGCCGTGGGG CAGCGGGGAG
GTGAGGCTGC CGCTCGGGCG CGACCTGATG TTCGTGCCGC GCCAGCCCTT CCTGCCCGCG
GGCAGCCTGC GCATGGTGCT GAGCTATCCC GACGACGCCG ACCGCCACGC CGACGCCGTG
CTCGAGCGTG CGCTCGAATG CGCCGGCATC GCCTGGCTGG CCCCCAAGCT CGACACCCAG
GAGGACTGGG GGCGCGAGCT GCCGCTGCGC ATCCAGCAGC GCCTGGGCGT CGCACGCGTG
TTCCTGCACC AGCCGGGGTG GATCTTCATC GAGGAGGCCA CCGACGCGCT CGCGCCCAAG
GAAGAGGTCG ACACCCTGGA GCTGCTGCAC CACGAGCTGC CCAGCTCGAC CCTGCTGGTG
ATCAGCCGGC GCGCACGCCA GAACCACTTC TTCGAGCGCC GGCTGCTGCT GCAGCGCCCG
CGCCCGGGCC TGCAGCCGCC GGCCGCACCC GCGGCGCGGC CGGAAACGCC CTCCCTACCC
GAAGCGTGA
|
|---|
| Protein sequence | MSSTHAASLP KQPHRRPPHR DGGRRFLLLA GGYWNCARKW QVRGTVLALA LLTMAQVGLA
IWVSYWNRDL FDALEERALS ELMKLVGVFV LIFALTMGVT ALHMHVKRRL QLDWRRWLTD
LLLEHWLAHG HLYRLQFTAG EHDNPDGRIA EDIRIATDVA VSLAHSLLFA LLILGSFIDI
LLRVSGSAPL PGTSIAVHGY MVLAAFLYAG VGAALGLMLG RPLIRATNRL QTVEANLRFG
LARAREHAEP IAMMHGEPHE RREAARLFDD VGRGWNRQTL AYLGIVSFST GYGTLLPVFP
ILIAAPQYIA GAMTLGVLMQ AAQAFQRLTT ALSWPIDNLG ELARCRASID RVASLYEDML
ALERAEARSR GRERIAVCSS PHPELELRQL RLQTPSGEIL LDDFDLRVRR GERVLICGDP
AVTVSLFKAV AGLWPWGSGE VRLPLGRDLM FVPRQPFLPA GSLRMVLSYP DDADRHADAV
LERALECAGI AWLAPKLDTQ EDWGRELPLR IQQRLGVARV FLHQPGWIFI EEATDALAPK
EEVDTLELLH HELPSSTLLV ISRRARQNHF FERRLLLQRP RPGLQPPAAP AARPETPSLP
EA
|
|---|
| |