Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tmz1t_0843 |
Symbol | gltD |
ID | 7084700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thauera sp. MZ1T |
Kingdom | Bacteria |
Replicon accession | NC_011662 |
Strand | + |
Start bp | 936125 |
End bp | 937588 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643697867 |
Product | glutamate synthase subunit beta |
Protein accession | YP_002354508 |
Protein GI | 217969274 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGC CCACCGGATT CATGGAATAT CAGCGTCTGT CCGAGGCCTA CGAGCCGGTC GACAAGCGCC TGAAGACCTA CAAGGAGTTC GTCGTCCGCC TCACCGACGA GCAGGCGTCG GTCCAGGGCG CGCGCTGCAT GGACTGCGGC ATCCCGTTCT GCAACAACGG CTGCCCGGTC AACAACATCA TCCCGGACTG GAACGACCTC GTGTATCGCG GCCACTGGCG CGAGGCGATC GAGGTGCTGC ACTCGACCAA CAACTTTCCC GAGTTCACCG GCCGCATCTG CCCCGCACCC TGCGAGGCGG CGTGCACGCT GAACATCAAC ACCGACGCGG TGGGCATCAA GTCGATCGAG CACGCGATCA TCGACAAGGC CTGGGAAGAG GGCTGGGTGG TGCCGCAGCC GGCCGAGGTC AAGACGGGCA AGAAGGTCGC CGTGGTCGGC TCCGGCCCGG CCGGCCTCGC GGCCGCGCAG CAGCTCGCGC GCGCCGGCCA CGACGTCACC GTGTTCGAGA AGAACGACCG CATCGGCGGC CTGCTGCGCT ACGGCATCCC CGACTTCAAG ATGGAGAAGT CGCTGATCGA CCGCCGTGTC GAGCAGCTCC AGGCCGAGGG CGTGGTGTTC CGCACCGGCG TGCTGGTCGG CGCGCAGAAT GTGCCCGCCG GCATCGTCAA TGATGCGAAG CAGGTCGTCA GCGCCGAGCA GCTCAAGCAG GACTTCGACG CCGTGGTGCT CGCCGGCGGC TCCGAGATCC CGCGCGACCT GCCGGTGCCG GGCCGCGAGC TCGGCGGCGT GCATTACGCG CTCGAGTTCC TCATCCCGCA GAACAAGCAG GTCGCCGGCG ACAAGCCCAA TCCGATCTCG GCCAAGGGCA AGCACGTGGT GGTGATCGGC GGTGGCGACA CCGGCTCAGA TTGCGTGGGC ACCTCCAATC GCCACGGCGC AGCCAGCGTG ACCCAGTTCG AGCTCATGCC GATGCCGCCC GAGCAGGAGA ACAAGGCGCT GACCTGGCCC TACTGGCCGA CCAAGCTGCG CACCTCGTCC TCGCACGAGG AAGGTTGCGA GCGCGACTTC GCCGTCGCCA CCAAGGAGTT CATCGGCAAG AACGGCAAGG TCAAGGCGCT CAAGGCCTGT CGCCTGGAGT TCAAGGACGG CAAGATGTCC GAGGTGCCGG GCTCCGAGTT CGAGATCAAG GCCGACCTGG TGCTGTTCGC GATGGGCTTC ACCCAGCCGG TGGGCGGCGT GCTCGAAGCC TTCGGTGTGG ACAAGGACGC CCGCGGCAAT GCCAAGGCGA GCACCGACGG TGCAGGCAGC TACACCACCA ACGTGCCCAA GGTCTTCGCC GCCGGCGACA TGCGCCGCGG GCAGTCGCTG GTGGTGTGGG CGATTCGTGA GGGCCGCCAG TGCGCCCGTG CGGTCGATGA GTTCCTGATG GGTGAGAGCT TGTTGCCCCG ATAG
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Protein sequence | MGKPTGFMEY QRLSEAYEPV DKRLKTYKEF VVRLTDEQAS VQGARCMDCG IPFCNNGCPV NNIIPDWNDL VYRGHWREAI EVLHSTNNFP EFTGRICPAP CEAACTLNIN TDAVGIKSIE HAIIDKAWEE GWVVPQPAEV KTGKKVAVVG SGPAGLAAAQ QLARAGHDVT VFEKNDRIGG LLRYGIPDFK MEKSLIDRRV EQLQAEGVVF RTGVLVGAQN VPAGIVNDAK QVVSAEQLKQ DFDAVVLAGG SEIPRDLPVP GRELGGVHYA LEFLIPQNKQ VAGDKPNPIS AKGKHVVVIG GGDTGSDCVG TSNRHGAASV TQFELMPMPP EQENKALTWP YWPTKLRTSS SHEEGCERDF AVATKEFIGK NGKVKALKAC RLEFKDGKMS EVPGSEFEIK ADLVLFAMGF TQPVGGVLEA FGVDKDARGN AKASTDGAGS YTTNVPKVFA AGDMRRGQSL VVWAIREGRQ CARAVDEFLM GESLLPR
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