Gene Tmz1t_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0843 
SymbolgltD 
ID7084700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp936125 
End bp937588 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID643697867 
Productglutamate synthase subunit beta 
Protein accessionYP_002354508 
Protein GI217969274 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID[TIGR01317] glutamate synthases, NADH/NADPH, small subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGC CCACCGGATT CATGGAATAT CAGCGTCTGT CCGAGGCCTA CGAGCCGGTC 
GACAAGCGCC TGAAGACCTA CAAGGAGTTC GTCGTCCGCC TCACCGACGA GCAGGCGTCG
GTCCAGGGCG CGCGCTGCAT GGACTGCGGC ATCCCGTTCT GCAACAACGG CTGCCCGGTC
AACAACATCA TCCCGGACTG GAACGACCTC GTGTATCGCG GCCACTGGCG CGAGGCGATC
GAGGTGCTGC ACTCGACCAA CAACTTTCCC GAGTTCACCG GCCGCATCTG CCCCGCACCC
TGCGAGGCGG CGTGCACGCT GAACATCAAC ACCGACGCGG TGGGCATCAA GTCGATCGAG
CACGCGATCA TCGACAAGGC CTGGGAAGAG GGCTGGGTGG TGCCGCAGCC GGCCGAGGTC
AAGACGGGCA AGAAGGTCGC CGTGGTCGGC TCCGGCCCGG CCGGCCTCGC GGCCGCGCAG
CAGCTCGCGC GCGCCGGCCA CGACGTCACC GTGTTCGAGA AGAACGACCG CATCGGCGGC
CTGCTGCGCT ACGGCATCCC CGACTTCAAG ATGGAGAAGT CGCTGATCGA CCGCCGTGTC
GAGCAGCTCC AGGCCGAGGG CGTGGTGTTC CGCACCGGCG TGCTGGTCGG CGCGCAGAAT
GTGCCCGCCG GCATCGTCAA TGATGCGAAG CAGGTCGTCA GCGCCGAGCA GCTCAAGCAG
GACTTCGACG CCGTGGTGCT CGCCGGCGGC TCCGAGATCC CGCGCGACCT GCCGGTGCCG
GGCCGCGAGC TCGGCGGCGT GCATTACGCG CTCGAGTTCC TCATCCCGCA GAACAAGCAG
GTCGCCGGCG ACAAGCCCAA TCCGATCTCG GCCAAGGGCA AGCACGTGGT GGTGATCGGC
GGTGGCGACA CCGGCTCAGA TTGCGTGGGC ACCTCCAATC GCCACGGCGC AGCCAGCGTG
ACCCAGTTCG AGCTCATGCC GATGCCGCCC GAGCAGGAGA ACAAGGCGCT GACCTGGCCC
TACTGGCCGA CCAAGCTGCG CACCTCGTCC TCGCACGAGG AAGGTTGCGA GCGCGACTTC
GCCGTCGCCA CCAAGGAGTT CATCGGCAAG AACGGCAAGG TCAAGGCGCT CAAGGCCTGT
CGCCTGGAGT TCAAGGACGG CAAGATGTCC GAGGTGCCGG GCTCCGAGTT CGAGATCAAG
GCCGACCTGG TGCTGTTCGC GATGGGCTTC ACCCAGCCGG TGGGCGGCGT GCTCGAAGCC
TTCGGTGTGG ACAAGGACGC CCGCGGCAAT GCCAAGGCGA GCACCGACGG TGCAGGCAGC
TACACCACCA ACGTGCCCAA GGTCTTCGCC GCCGGCGACA TGCGCCGCGG GCAGTCGCTG
GTGGTGTGGG CGATTCGTGA GGGCCGCCAG TGCGCCCGTG CGGTCGATGA GTTCCTGATG
GGTGAGAGCT TGTTGCCCCG ATAG
 
Protein sequence
MGKPTGFMEY QRLSEAYEPV DKRLKTYKEF VVRLTDEQAS VQGARCMDCG IPFCNNGCPV 
NNIIPDWNDL VYRGHWREAI EVLHSTNNFP EFTGRICPAP CEAACTLNIN TDAVGIKSIE
HAIIDKAWEE GWVVPQPAEV KTGKKVAVVG SGPAGLAAAQ QLARAGHDVT VFEKNDRIGG
LLRYGIPDFK MEKSLIDRRV EQLQAEGVVF RTGVLVGAQN VPAGIVNDAK QVVSAEQLKQ
DFDAVVLAGG SEIPRDLPVP GRELGGVHYA LEFLIPQNKQ VAGDKPNPIS AKGKHVVVIG
GGDTGSDCVG TSNRHGAASV TQFELMPMPP EQENKALTWP YWPTKLRTSS SHEEGCERDF
AVATKEFIGK NGKVKALKAC RLEFKDGKMS EVPGSEFEIK ADLVLFAMGF TQPVGGVLEA
FGVDKDARGN AKASTDGAGS YTTNVPKVFA AGDMRRGQSL VVWAIREGRQ CARAVDEFLM
GESLLPR