| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0839 |
|---|
| Symbol | aroK |
|---|
| ID | 7084696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 928216 |
|---|
| End bp | 928746 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643697863 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_002354504 |
|---|
| Protein GI | 217969270 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.657447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTGTC TGATACTGAT CGGCATGATG GGCGCCGGCA AGACCACGGT CGGCAAGGAA
CTGGCGCGCA GGCGCAGGAT GCGCTTCGCC GATTGCGACC AGGCGATCGT GGCGCGCACC
GGCGTCAGCA TTCCGACCAT CTTCGAGCTC GAGGGCGAGG CGGGCTTCCG CCGCCGCGAG
ACGCAGATGA TCGACGAGCT CACCCGCGAG CCCGACCTCG TGCTCGCCAC GGGCGGCGGG
GTCGTCGTCA CCCCGCTCAA CCGCGAGCTG ATGCGCGAGC GCGGCATCGT CATCTACCTC
GACGTGCCGA CGCAGGTGCT GTTCGAGCGC ACCCGCCACG ACCGCAACCG CCCGCTGCTG
CAGGTCGAAA ATCCGCGCCA GCGCATCGAG GAGCTTCACC GCGCGCGCGA CCCCCTCTAT
CGCGAGACCG CCCACATCAT CCTCGCAGGC GGGCGCGGCA ACCCCTGCAA CATGGTGCGC
CAGATCGAGG AGGCGCTCGC CCGCTACAAG GCCGACACAT GCAGACCCTG A
|
|---|
| Protein sequence | MSCLILIGMM GAGKTTVGKE LARRRRMRFA DCDQAIVART GVSIPTIFEL EGEAGFRRRE
TQMIDELTRE PDLVLATGGG VVVTPLNREL MRERGIVIYL DVPTQVLFER TRHDRNRPLL
QVENPRQRIE ELHRARDPLY RETAHIILAG GRGNPCNMVR QIEEALARYK ADTCRP
|
|---|
| |