| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0838 |
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| Symbol | |
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| ID | 7084695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 925989 |
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| End bp | 928124 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643697862 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_002354503 |
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| Protein GI | 217969269 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.673072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACACC GCATCGGAGT GCTGCTGATC GCAGCCGCTT TCGCAGGCCT GGCGCCCGCG
CCCGCCGTGC TGGCCCAGGA CGCAGAGCAG GCGCACAGCT TCGGCAACCG GATCGAGGGA
CTGGAGGTCG CGGAGCAGGG TGGCGCGATC TACGTGCGCC TGACCTTGCG CGAGCCGCTC
GCCAGCCCGC CGCCGAGCTT CAGCGTGGCC AACCCGGCAC GCATCGCCTT CGACTTCCCG
GGCACCGCCA ACGCCCTCGG GCGTAACGTG CAGGCGATCG ACCAGGGCGA CCTGCGCAGC
GCCAACATCG TCCAGGCCGG CGACCGCACC CGGTTGGTGC TCAATCTCAC CCGCATGAGC
CCCTACGAGG CGCGCGTGCA GGGTCGCGAC CTCATCATCG CGCTCTCCCC GGCCGCGTCG
CGCGCGGCGC AGGGCACGGT GGTGAGCGAA GCCGCGGCCA ACTTCGCCGC GCCGCGTTCG
AGTGCGGCGG CCGCGGGCGG GCTGGCGGTG CGCGACATCA ACTTCCGCCG CGGTACGGGC
GGCGAGGGGC GCGTGGTGGT CGACCTGTCC AACCCGGACA CCGGCATCGA CATCCGCCAG
CAGGGCGGCA ACCTCGTCAT CGACTTCCTG CAGGCCGCGC TGCCCGAGCA CCTGCGCCGC
CGCTCCGACG TCACCGACTT CGCCACCCCG GTCACCTCGA TGACCGCGCA GCAGGTGGGC
GACCGCGTGC GCCTGACCGT GACGCCCAAC GGCCTGTGGG AGCACAACGC CTACCAGAGC
GACAACCGCT TCGTGCTCGA GGTGCGTCGC GTCGCCGAGG ACCCCGCCAA GCTCGGCGGC
GGGCGCAGCG ACTACAAGGG CGAGAAGCTC TCGCTCAACT TCCAGAACGT GGACGTGCGC
TCGGTGCTGC AGGTCATCGC CGACTTCACC GACTTCAACA TCATCACCTC CGACTCGGTA
CAGGGAAATT TGACCCTGCG CCTGAAGGAC GTGCGCTGGG ATCAGGCCTT TGACATTATC
TTGCGGGCCA GAGATTTGGA TATGCGAAAG AACGGCAATG TGATTTGGGT GGCGCCGAGG
GATGAACTTG CATTGCGTGA AAAGGCTCAG AACGAGGCGC TGGCGGACAT CGAGTCCTTG
GAGCCGCTGA GCACAGAGAG CATCCGATTA AACTACCACA AAGCGAGAGA GATTGGCGAT
TTGCTGTCGA GTGGTGGAAA AGGTGATCGC GGTTTTCTTT CAAAGAGGGG AAAGGTTGCA
TTCGACGAGC GCACTAATCG TATCTTTGTC ACAGATGTGT CGTCTCGATT GCAGTCTGTA
CGCAACCTCA TCAGTGATGT CGATGTCGCT CCGCGACAGG TCCTTATAGA GGCACGCATC
GTGGAGGCAA ACAAGACATT TTCCCGGGAT CTTGGGGTGA GGCTCGGTTT AGGAAAGTCC
AAGCCTTGGA AGATAAACGA CGGTGGTGCC CAGATCGGAT TTGGGTCCTC TACCTTGGGA
GGCTCCGCAG GATCTTCCGG CTCCTTTAGA CCAGAGACAG CTACAAGTGG CGCTGATATT
CAAAATCCCT ACGGATCTTT TGCGCTAAGC ATCTTTAACA GCAGCGTTAC GCGTTTCCTT
AATCTGGAAT TGCAGGCTCT TGAGTCTGAC GGGCGTGGTC GGGTTGTTTC GAGCCCGAGG
GTTTTAACCG CTAACCAAGT CGAAGCGTTG ATCAAGCAGG GCACGCAAAT CCCAATCCCG
ATTCCATCGA CGCAAGTCGG TGGAGAGCCA ACGGTGGAGT ATAAGGATGC CGTTCTCTCG
CTTAAAGTTA GGCCCAGCAT CACTCCAGAT GGCCGAATCC AGTTATCGGT ATTGGTAAAC
AAGGATCGGC CGGATTTTAC GAACGTTGTT CTCGGTCGCC CGTCGATTGA CACGAAGAGC
GTCCAGACTG AAGTTACAGT TGAAAATGGG GGAACGCTTG TCATCGGTGG TGTGTACGAA
GAGCAAGAGC TGAATGGAGA GGACCGAGTG CCCGTGCTAG GCGAACTGCC GGTCCTTGGC
GGCCTGTTCC GAACTCGATC GACGATTGCC GAGAAGAAGG AGTTGTTGGT TTTCATAACG
CCTCGACTTG TCTCCGAAAG TCTTACGTTG CGCTGA
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| Protein sequence | MRHRIGVLLI AAAFAGLAPA PAVLAQDAEQ AHSFGNRIEG LEVAEQGGAI YVRLTLREPL
ASPPPSFSVA NPARIAFDFP GTANALGRNV QAIDQGDLRS ANIVQAGDRT RLVLNLTRMS
PYEARVQGRD LIIALSPAAS RAAQGTVVSE AAANFAAPRS SAAAAGGLAV RDINFRRGTG
GEGRVVVDLS NPDTGIDIRQ QGGNLVIDFL QAALPEHLRR RSDVTDFATP VTSMTAQQVG
DRVRLTVTPN GLWEHNAYQS DNRFVLEVRR VAEDPAKLGG GRSDYKGEKL SLNFQNVDVR
SVLQVIADFT DFNIITSDSV QGNLTLRLKD VRWDQAFDII LRARDLDMRK NGNVIWVAPR
DELALREKAQ NEALADIESL EPLSTESIRL NYHKAREIGD LLSSGGKGDR GFLSKRGKVA
FDERTNRIFV TDVSSRLQSV RNLISDVDVA PRQVLIEARI VEANKTFSRD LGVRLGLGKS
KPWKINDGGA QIGFGSSTLG GSAGSSGSFR PETATSGADI QNPYGSFALS IFNSSVTRFL
NLELQALESD GRGRVVSSPR VLTANQVEAL IKQGTQIPIP IPSTQVGGEP TVEYKDAVLS
LKVRPSITPD GRIQLSVLVN KDRPDFTNVV LGRPSIDTKS VQTEVTVENG GTLVIGGVYE
EQELNGEDRV PVLGELPVLG GLFRTRSTIA EKKELLVFIT PRLVSESLTL R
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