Gene Tmz1t_0836 details

Gene Information

• Locus tag: Tmz1t_0836
• ID: 7084693
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 924797
• End bp: 925471
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 643697860
• Product: Pilus assembly protein PilO
• Protein accession: YP_002354501
• Protein GI: 217969267
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3167] Tfp pilus assembly protein PilO

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTCG ATCTGGGCGC GCTGCGCGAG GGCATCGACT TCCGCCGCCT GGCGGACGAT 
TTTCGTGGGC TCGATCCGCA CGATCCGGGC ATGTGGCCCG CCGCGCCGCG GGTGGTGGTC 
GCGGTCTGCC TGCTGGTGCT GACGGTCGCC GGGTTCTGGT GGTTCGACTG GCAGGGTCAG 
GTCGAGACCC TCGAGGCGCG CCAGGCCGAG GAGGTGCAGC TGCGCGAGAG CTGGGTGACG 
AAGAAGCGCC AGGCAGTCAA TCTCGACGAG CACCGCCGCC AGCTCGCCGA GATCGACCGC 
CAGTTCGGCG CCCTGCTCAA GCAGTTGCCC AACCGTGCCG AAATGGACTC CCTGCTCTCC 
GACATCAACC AGGCCGGCCT CGGCCGCGGC CTCCAGTTCG AGCTCTTCAA GCCGGGCGCA 
GACGTGGTCA AGGAGTTCTA TGCCGAGATG CCGATCGACG TGCGCGTGAC CGGCGTTTAT 
CACGATCTCG GGGAGTTCGT CGCCGATCTC GCCAGCATGC CGCGGGTGGT GACGCTGGGC 
GACGTCGCCA TCGAGGCCGA CAAGGATGGA CGCCTCAAGC TGCAGGCCAA GGCGGTCACC 
TACCGCTACC TCGACGAGGA AGAGCTCGCG CAGCAACGCA AGGCGGCGCA GGCCGCGAAG 
CAGGGGAACA AATGA 

 

Protein sequence

MSFDLGALRE GIDFRRLADD FRGLDPHDPG MWPAAPRVVV AVCLLVLTVA GFWWFDWQGQ 
VETLEARQAE EVQLRESWVT KKRQAVNLDE HRRQLAEIDR QFGALLKQLP NRAEMDSLLS 
DINQAGLGRG LQFELFKPGA DVVKEFYAEM PIDVRVTGVY HDLGEFVADL ASMPRVVTLG 
DVAIEADKDG RLKLQAKAVT YRYLDEEELA QQRKAAQAAK QGNK