Gene Tmz1t_0807 details

Gene Information

• Locus tag: Tmz1t_0807
• ID: 7084199
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thauera sp. MZ1T
• Kingdom: Bacteria
• Replicon accession: NC_011662
• Strand: +
• Start bp: 892879
• End bp: 894894
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643697831
• Product: 3-hydroxyacyl-CoA dehydrogenase NAD-binding
• Protein accession: YP_002354472
• Protein GI: 217969238
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1250] 3-hydroxyacyl-CoA dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.990603
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCGA ACATGCGACA CGACTGGAAG CACTGGCGCC TGCGCCGTGA GGACACCGGG 
CTGGCCTGGC TGGATCTGGA TAAGGCGGAT GCGAGCACCA ATGTGCTGTC GTCCGAGGTA 
ATGAGAGAAT TCGCCCGCGT GCTCGACGCG CTCGATGCCG CGCCGCCCAA GGCGCTGGTG 
ATCGCTTCCG CCAAGCCGGC CGGGTTCATC GCCGGCGCCG ACATCGAGGA GTTCTCGCGG 
CTGGATTCGG TGCTCGCCGC GCGCATGCTG GTCGAGCGCG GCTGGCTGCT GTTCAACCGC 
CTCGCCGCGG TGTCCTACCC GACGCTGGCA CTGATCCGCG GCCATTGCAT GGGTGGCGGT 
CTGGAGCTCG CGCTCGCCTG CCGCCATCGC ATCGTCGTCG ACGAACCCGG CACCAAGCTT 
GCGCTGCCCG AGGTCATGCT CGGCATCGTC CCCGGCTGGG GCGGCATGCT GCGCCTGCCC 
GCGCTGATCG GCCCTGCGGC GGCCCTCGAC CTGATGCTGA CCGGCAAGAG CGTCGACTCG 
AAGAAGGCCA AGCGCATCGG TCTCGCCGAT GACTGCGTTC CCGCGCGGGT CATGGAGTCG 
GCGGCGCGCA TCGTGGCGCT CGGCGCCAAG CCCTTCCGAC AACTGCCGGC GAAGGAGCGT 
GCCACGCGCT GGGCGATGAA CGGCCCGCTG CGCAAGATGG TCGCCGACAA GGCGCGCGCC 
CAGGCTGCGC GCAAGGTCAG CCGCGCCAAC TACCCGGCCC CCTTCGCGAT CGTCGACATC 
TGGGAGAAAT ACGGTGGCAA CGCGCTCGAC GTGCCGGCCA GCGACCCGTC CGCGCTCGAC 
GCCATCTTCA CCTCGCCCAC CGCGCGCAAC CTGGTGCGCG TCTTCCACCT GCAGGAGCGC 
CTGAAGGCCT TCGGCAAGGA CAGCGACTTC ACGCCGCGCC ATGTGCATGT GGTCGGCGCC 
GGCGTGATGG GCGGCGACAT CGCCGCGGTG TGCGCGCTGC GCGGCATGAC GGTGACGCTG 
CAGGACCAGT CGGTCGAGCG CATCGCGCCC GCCATCGCCC GCGCCGCCAA ATTGTTCGAG 
CGCCGCCACA AGGGCGATGC GAAGCAGGTC CGCTTCACCC TCGACCGCCT GATCCCCGAC 
CCCAGGGGCG AGGGTGCGGC GCGCGCCGAC GTGATCATCG AGGCGATCTT CGAGAACCTC 
GAGGTCAAGC GCGGCCTCTT TGCCGAACTC GAGGCGCGTG CGAAGCCCGA CGCGGTGCTC 
GCCACCAACA CCTCCAGCCT GCGCCTGGAA GACGTCGCCA CGGCCTTGAA GGACCCGTCG 
CGCCTGGTCG GCATCCACTT CTTCAACCCG GTGCCGATGC TGCCGCTGGT CGAGGTGGTG 
CAGGGCGAGG CCACCGACGC CGAGGTGCTG CGCCGCGCCA CCGGCTTCGT GCGCCGCATC 
GACAAGCTGG CGCTGCCGGT GAAGAGCGCG CCCGGCTTCC TGGTCAACGC CGTGCTCGGT 
CCCTACATGC TCGAAGCCCT GCGCTGCGTT GAGGAAGGCG TCGCGCCCGA AACCGTGGAC 
GCCGCGCTGG TTGCCTTCGG CATGCCGATG GGGCCGGTCG AGCTGGTCGA CACCGTGGGC 
CTGGACATCG CCGTGGCCGC GGGCAAGGCC CTGGCGGGCG AAGGCGCCGA GCCGCCGGCG 
CGGCTGCTGA AGCTGGTCGG TGAAGGCAAG CTCGGACGCA AGAGCGGCGA AGGCTATTAC 
CGCTGGGTGG ATGGCAAGGC GGTCAAGGCC GGCGACGAGG ACGAACGCAA GGGTGGGCTA 
TTGCGCAAGC GCAGGCCCGC GCCGCCACCG CCCATCCCCG CCGGGCTCGC CGAGCGCGTG 
CTCGCGCCGC TGCTGGCGGC CACGCGGCGC TGCGTGGAGC TCGGCGTGGT GGACGATGCG 
GATCTCGCCG ATGCCGGCGT GATCTTCGGC ACCGGGTTCG CACCGCATAC CGGCGGGCCG 
CTGCACTGCT GCAAGGCAAA AGGGCGGCCC GAATAG 

 

Protein sequence

MSANMRHDWK HWRLRREDTG LAWLDLDKAD ASTNVLSSEV MREFARVLDA LDAAPPKALV 
IASAKPAGFI AGADIEEFSR LDSVLAARML VERGWLLFNR LAAVSYPTLA LIRGHCMGGG 
LELALACRHR IVVDEPGTKL ALPEVMLGIV PGWGGMLRLP ALIGPAAALD LMLTGKSVDS 
KKAKRIGLAD DCVPARVMES AARIVALGAK PFRQLPAKER ATRWAMNGPL RKMVADKARA 
QAARKVSRAN YPAPFAIVDI WEKYGGNALD VPASDPSALD AIFTSPTARN LVRVFHLQER 
LKAFGKDSDF TPRHVHVVGA GVMGGDIAAV CALRGMTVTL QDQSVERIAP AIARAAKLFE 
RRHKGDAKQV RFTLDRLIPD PRGEGAARAD VIIEAIFENL EVKRGLFAEL EARAKPDAVL 
ATNTSSLRLE DVATALKDPS RLVGIHFFNP VPMLPLVEVV QGEATDAEVL RRATGFVRRI 
DKLALPVKSA PGFLVNAVLG PYMLEALRCV EEGVAPETVD AALVAFGMPM GPVELVDTVG 
LDIAVAAGKA LAGEGAEPPA RLLKLVGEGK LGRKSGEGYY RWVDGKAVKA GDEDERKGGL 
LRKRRPAPPP PIPAGLAERV LAPLLAATRR CVELGVVDDA DLADAGVIFG TGFAPHTGGP 
LHCCKAKGRP E