Gene Tmz1t_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTmz1t_0790 
Symbol 
ID7084182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThauera sp. MZ1T 
KingdomBacteria 
Replicon accessionNC_011662 
Strand
Start bp873686 
End bp874561 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID643697814 
ProductAuxin Efflux Carrier 
Protein accessionYP_002354455 
Protein GI217969221 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATCC GAATCGTCTC CATCCTGTTC CCGCTGTTCG CGATCACCGC GCTGGGCTAT 
TTCGTCGGCC GGCGCATGAA GCCGGACCTG TCGCACGCCA ACAAGCTGAA CATGGATGTC
TTCGTGCCCG CGCTGGTGTT CGGTGCGCTG GTCGGCAAGG ACTTCCGCCT CGGCGAATAC
CTGCCGCTGC TGTTCGCGAC CGTGGTGATC ATCGTCGGCT CCGGTGTGGC CGGCTGGCTG
GTCGCGCGTG CGGCCGGGAT CGCCACCAAG ACGCTGGTGC CGCCGATGAT GTTCAACAAC
TGCGGCAACC TCGGCCTGCC GCTGGCGGTG CTCGCCTTCG GCGAGTCGGC GCTGGCTCCG
GCGGTGGTGA TGTTCGTGGT GTCGAACGTG ATCCACTTCT CCTACGGCGC CTGGCTGCTG
GACCACCATA CCAAGCTGAC CACGGTGTGG CGCTCGCCCT CCATCCTGGC GACGATCGCG
GGCCTGGCGG TCGGCTTCCT CGGCATCGAG GTGTGGCCGC CGCTGCTGAT GTCGATCGAG
ATGGTCGGCG ACATCTCGAT CCCCCTGATG TTGTTCGCGC TCGGCGTGCG CCTGGCCGAT
TCGCGCATCA GCGCCGTCGG CTTCGGCCTC TTCGGTGCGG TGCTACGCCC GGTGGTGGGC
ATGGCGCTGG CCTGGGCCCT GCTGCAGATG CTCGAGCTTC CGCCGCGCGA GCAGGCGCTG
TTGCTCGTGT TCGGCGCCCT GCCGCCGGCG GTGCTGAACT ACATGTTCGC CGAGCGTTAC
GACCAGGAGC CCGACAAGGT GGCCTCGATG GTGCTGATCG GCAACCTCGC TGCGGTGGTT
TTCCTGCCGA TCGCGCTGGC GCTGGTACTC GACTGA
 
Protein sequence
MLIRIVSILF PLFAITALGY FVGRRMKPDL SHANKLNMDV FVPALVFGAL VGKDFRLGEY 
LPLLFATVVI IVGSGVAGWL VARAAGIATK TLVPPMMFNN CGNLGLPLAV LAFGESALAP
AVVMFVVSNV IHFSYGAWLL DHHTKLTTVW RSPSILATIA GLAVGFLGIE VWPPLLMSIE
MVGDISIPLM LFALGVRLAD SRISAVGFGL FGAVLRPVVG MALAWALLQM LELPPREQAL
LLVFGALPPA VLNYMFAERY DQEPDKVASM VLIGNLAAVV FLPIALALVL D