| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0770 |
|---|
| Symbol | |
|---|
| ID | 7084161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 856748 |
|---|
| End bp | 858202 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643697794 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_002354436 |
|---|
| Protein GI | 217969202 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.172723 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA CCGTCGACTG GATCAACGGC TGGGTCTGGA GCCCCGCCCT CGTTTACCTG
TGCCTGATCG TGGGCCTGTA CTTTTCCATC CGCACCCGTT TCATGCAGGT GCGCCACATC
GGCGAGATGG TGCGGGCGAT GTTCCGCGGC AAGAGCTCCG CGGCGGGCGT GTCGTCCTTC
CAGGCGCTCA CCATCGCGCT CTCCGGTCGG GTGGGTACCG GCAATATCGC CGGCGTCGCC
ACCGCGATCG GCTTCGGCGG TCCGGGCGCG GTGTTCTGGA TGTGGATGGT GGCCTTCCTC
GGCGCCGCCA CGGCTTACGT CGAGTCGGCA CTCGGGCAGA TCTACAAGAC CGAACACCAC
GGACTCTACC GTGGCGGTCC GGCGTATTAC ATCGAGAAGG GCCTGGGCTG GCGCGTCTAT
GCGATCGTGT TCGCGGTCGC CACCGTGTTC GCGTGCGGCG TGCTGCTGCC CGGCGTGCAG
ACCAACAGCA TCGCGGCCAG CATGGAAAAC GCCTTCGGCG TGGCGCCGGC GGTCACCGGC
ACCATCATCG TGATCCTGCT CGGCCTGATC ATCTTCGGTG GCGTGCGCCG CATCGCCCAG
GTCACCCAGG TGGTGGTGCC CTTCATGGCG CTCGGCTACA TCCTCGCCGC GGCCGTGGTG
GTGGCGCTCA ACGTCGACAA GGTGCCCGAG GTCATCCGCC TGATCCTGTC CTCGGCCGTC
GGTCTCGACG CGGGCTTCGG CGCGATGATC GGCCTGGCCA TCCAGTGGGG TGTCAAGCGC
GGCGTGTATT CCAACGAAGC CGGCCAGGGC ACCGGCCCGC ACGCCGCCGC TGCCGCCGAA
GTGCCGCACC CGGCTGCGCA AGGCCTCGTG CAGGCCTTCT CGGTGTATGT GGATACCCTC
TTCGTGTGCT CGGCGACCGC CTTCATGGTG CTGATCACCG GCACCTACAA CGTCACCGGA
CCGGACGGCG CGCAGGTGTT CACCGGGCTG GCCAACATCT CGGCGGGCAC CGGCTTCACC
CAGGCGGCGA TGGAGCAGGT GCTGCCGGGC TTCGGCTCGA TGTTCGTGGC GGTGGCGCTG
TTCTTCTTCG CCTTCACCAC GGTGATCGCC TACTACTACA TCGCCGAGAC AAACGTCGCC
TATCTGACGC GCAATCTGCG CTCGGAGGCC TTGATCTTCG TGCTGCGCGT GGCGCTGATC
GGTTCGGCCC TGTATGGCTG CGTGCGCACC AGCGACCTGG CCTGGGGCCT GGGCGACATC
GGCGTCGGCC TGATGGCGTG GCTCAACATC TTTGCCATCC TGGTGCTGCA GAAGCCGGCG
CTGCTGGCGC TCAAGGACTA CGAGGCGCAG CAGGCCCAGG GACGCCTCGA GCCCCAGTTC
GACCCGCGCG CGCTCGGCAT CGTGAATGCC GACCTGTGGG TGAAGATCGC CGATCGCAGG
AAGCGCGAAG GCTGA
|
|---|
| Protein sequence | MQATVDWING WVWSPALVYL CLIVGLYFSI RTRFMQVRHI GEMVRAMFRG KSSAAGVSSF
QALTIALSGR VGTGNIAGVA TAIGFGGPGA VFWMWMVAFL GAATAYVESA LGQIYKTEHH
GLYRGGPAYY IEKGLGWRVY AIVFAVATVF ACGVLLPGVQ TNSIAASMEN AFGVAPAVTG
TIIVILLGLI IFGGVRRIAQ VTQVVVPFMA LGYILAAAVV VALNVDKVPE VIRLILSSAV
GLDAGFGAMI GLAIQWGVKR GVYSNEAGQG TGPHAAAAAE VPHPAAQGLV QAFSVYVDTL
FVCSATAFMV LITGTYNVTG PDGAQVFTGL ANISAGTGFT QAAMEQVLPG FGSMFVAVAL
FFFAFTTVIA YYYIAETNVA YLTRNLRSEA LIFVLRVALI GSALYGCVRT SDLAWGLGDI
GVGLMAWLNI FAILVLQKPA LLALKDYEAQ QAQGRLEPQF DPRALGIVNA DLWVKIADRR
KREG
|
|---|
| |