| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0757 |
|---|
| Symbol | |
|---|
| ID | 7084148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 839606 |
|---|
| End bp | 841342 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643697782 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002354424 |
|---|
| Protein GI | 217969190 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCG GCCTGATCCA TGCAGAGCGG CCCGACGAGT TGCGCCGCGG CCTGCGCTGG
CTGTACGGCT TCGTGCGCCC GCAGCGCCGC CGCATTGCCG GCCTGCTGCT GCTCTCCTGC
GCGGCCACCC TGCTGGTGCT GCTGCAGCCC TGGCTGACCA AGCTGCTGAT CGACGAGGGC
CTGCTCGCGC GCGACTACCG CACCCTGCTG ATGGTCGCCG GCGCGATGAT CGCGGTCGGC
ATCGTCGGCA CCGTGCTCGC CGGGGTGAAC CGGCAATTGC ACACCCGTCT GTCCGGCTCC
ATCCTGTTCG CGCTGCGCAG CGACCTCTAT CGCCACCTGC AGACGCTGTC GCCCGCCTTC
TACGGCCGTC AGCGCATGGG CGACCTGCTG TCGCGCCTCG ACGGCGACGT CGCCGAGATC
CAGCGTTTCG CTGTGGATAG CCTGTTCGCA GCGGTGAGCA GCGTGATCGG CCTGCTCGGC
GCGGTGGCGC TGATGCTGAG CCTGTCGTGG AAGCTGTCCT TGCTGGTGCT GGTGCTGGTG
CCGCTCGAGA CGCTGTGGTT GCGGCGGATG CGGCGCAAGG TCGAGGCGCG CACGCGCACC
GTGCGCGAGC GCGCGGCGGA TGTCTCGAGC TTTCTGGTCG AGACCCTGCC GGCGATGAAG
TTCATCCAGG CTTCGCGCCG CGAGGCCGAC GAGCGCAGCC GGCTCGACGA TCTCGGCGCG
CGCTACCTCG ACGATCTGCT GCGCCTGCAG CGCACCGAGT TCCTCACCCA TGCGATCCCG
TCCACGCTGA CCTCGGCGAC GCGCGCCGCC GCGTTCATGA TCGGCGGCTG GTGGGTGATC
GAGGGCAGCT GGCAGCTCGG CGCGCTGATC GCGTTCTCCA CCTACCTCGG CATGGCCACC
GGGCCGGTCA ACAGCCTGCT CGGCCTGTAT GTCGCGATCC AGCGCATGAG CGTGAGTCTG
CGGCGGGTGA GCGAGCTGCG CGAGGCGCCG GCCGACGTCG TGGATAGCGC GCACCCCGGC
GCGGCACAGC GGGCCGTGCC GGCGTGGCAG GGCCGGATCG AGTTCGATGC GGTCGTCTTC
CACCACCAGG GACGCGCCGA GGCGGTGCTC GACGGCGCCC GACTGACGGT ACCCGCGGGC
AGCAAGGTCG CACTGAGCGG CGCTTCGGGC GTCGGCAAGT CCACGCTGAT CGACCTGCTG
CACCGTCATT ACGACCCCCA GGCCGGGACC ATCCGGCTCG ACGGCGCCGA CCTGCGCGCG
CTGCCGCTCG GCGCGCTGCG CCGCGCGGTG GCGGTGGTGA GCCAGGACAT CGTGCTGTTC
CGCGGCACGC TCGCCGAGAA CATCCGCTAC GCCGCGCCGC AGGCGGACGA GGGGGCGGTG
CGTGCCGCGG CGCGGCGGGC GCACCTCGAC GCCTTGATCG CAAGCCTGCC ACTGGGGCTG
GAGACAGCGC TCGGCGAGCG CGGTCAGCAG CTCTCCGGCG GCCAGCGCCA GCGCATCGCG
ATCGCGCGTG CGCTGCTGCA GGAGCCGTGC GTCCTGGTGC TCGACGAGGC GACCTCGGCG
GTCGACGAGG CGACCGAGGC GGCGATCATC GCCGAGGTCG ATGCGCTCTT CGCCGGACGC
ACGCGGATCC TGATCAGCCA CCGCGCGGCG ACGCTCGCCG GTTGCGATCT GCGCGTGCAC
CTCGAGCGCG GGCGGCTCGA GGTGCTGCCG CCGGCGGCGG TGACGGTGCG GTCATGA
|
|---|
| Protein sequence | MLAGLIHAER PDELRRGLRW LYGFVRPQRR RIAGLLLLSC AATLLVLLQP WLTKLLIDEG
LLARDYRTLL MVAGAMIAVG IVGTVLAGVN RQLHTRLSGS ILFALRSDLY RHLQTLSPAF
YGRQRMGDLL SRLDGDVAEI QRFAVDSLFA AVSSVIGLLG AVALMLSLSW KLSLLVLVLV
PLETLWLRRM RRKVEARTRT VRERAADVSS FLVETLPAMK FIQASRREAD ERSRLDDLGA
RYLDDLLRLQ RTEFLTHAIP STLTSATRAA AFMIGGWWVI EGSWQLGALI AFSTYLGMAT
GPVNSLLGLY VAIQRMSVSL RRVSELREAP ADVVDSAHPG AAQRAVPAWQ GRIEFDAVVF
HHQGRAEAVL DGARLTVPAG SKVALSGASG VGKSTLIDLL HRHYDPQAGT IRLDGADLRA
LPLGALRRAV AVVSQDIVLF RGTLAENIRY AAPQADEGAV RAAARRAHLD ALIASLPLGL
ETALGERGQQ LSGGQRQRIA IARALLQEPC VLVLDEATSA VDEATEAAII AEVDALFAGR
TRILISHRAA TLAGCDLRVH LERGRLEVLP PAAVTVRS
|
|---|
| |