| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0699 |
|---|
| Symbol | cca |
|---|
| ID | 7083928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | - |
|---|
| Start bp | 782366 |
|---|
| End bp | 783592 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643697725 |
|---|
| Product | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase |
|---|
| Protein accession | YP_002354367 |
|---|
| Protein GI | 217969133 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.792233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCT ATGTCGTGGG CGGAGCGGTG CGCGACGCCC TGCTCGGCCT GCCGGTGAAG
GATCGCGACT GGGTGGTGGT CGGCAGCACG CCCGAGGAGA TGCTCGCGCG CGGCTTCCGC
CCGGTCGGCC GCGATTTTCC GGTCTTCCTG CATCCGCACA CCAACGAGGA ATATGCGCTC
GCGCGCACCG AGCGCAAGTC GGGCCACGGC TACACCGGCT TCGTCTGCCA CGCCTCGCCC
GAGGTCACGC TCGAAGAGGA CCTGCTGCGC CGCGACCTCA CCATCAACGC GATCGCGCGC
GCCGAGGACG GCCGCCTGAT CGACCCCTGC GGTGGCCGGC GCGACCTCGC CGCGCGCGTC
TTCCGCCATG TGTCGCCCGC CTTCGCCGAG GATCCGCTGC GCATCCTGCG CGTGGCGCGC
TTCTCCGCGC GCTTCACCGA CTTCGAGCTG GCACCCGAGA CCCTGGAACT GATGCGCGCG
ATGGTCGTGG CCGGCGAGGT CGACCATCTG GTCGCCGAGC GCGTCTGGCA GGAACTCGCG
CGCGGGCTCA TGGAGGCGCG CCCCTCGCGC ATGATCCGCG TGCTGCGTGC CTGCGGCGCA
CTCGCACGCC TGCTGCCCGA GCTCGACCGC CTGTTCGGGA TCCCGCAGCC GGAGAAGTAC
CACCCCGAGA TCGACACCGG CGAGCACGTG CTGATGGTGC TCGACCACGC CGCCGCCGCG
GACGAGCCGC TCGCGGTGCG CTGGGCCTGC CTGCTGCACG ACCTCGGCAA GGGCGACACG
CCCGCCCACC TGCTGCCGCA CCATTACGGC CACGAGGCCG CGAGCGCGCG CCGCGCGCGC
GAGGTGTCGG AACGCCTGAA GGCCCCCGCC GACTGCCGCG ACCTCGCCGA GATGGTGGCG
CGCGAGCACG GCATCCTGGC GCGCGCGCAC GAGCTGCGCG CCGAAACCAT GGTCAAGCTG
ATCGAACGCT GCGACGGCCT GCGCCGTCCG CAGCGCTTCC TCCTGATGCT GCAGGCGGCC
GCCTGCGACC ACGCCGGCCG CGGCAGCGGC GCGGAAAACG CGTCGGAATG GAGACCCTTG
TCACGCTGGC AGGCCGCGCT GCAGGCCGTG CGCGCCGTCG ATGCCGGTAG AATCGCAACC
GAGTGCAGCG ACAAATCGCT GATTCCTCAG GCCTTGCACA CCGCCCGCGT GGCGGCCGTG
AAGGCCCTGG ACAAGGACCC CGCATGA
|
|---|
| Protein sequence | MQAYVVGGAV RDALLGLPVK DRDWVVVGST PEEMLARGFR PVGRDFPVFL HPHTNEEYAL
ARTERKSGHG YTGFVCHASP EVTLEEDLLR RDLTINAIAR AEDGRLIDPC GGRRDLAARV
FRHVSPAFAE DPLRILRVAR FSARFTDFEL APETLELMRA MVVAGEVDHL VAERVWQELA
RGLMEARPSR MIRVLRACGA LARLLPELDR LFGIPQPEKY HPEIDTGEHV LMVLDHAAAA
DEPLAVRWAC LLHDLGKGDT PAHLLPHHYG HEAASARRAR EVSERLKAPA DCRDLAEMVA
REHGILARAH ELRAETMVKL IERCDGLRRP QRFLLMLQAA ACDHAGRGSG AENASEWRPL
SRWQAALQAV RAVDAGRIAT ECSDKSLIPQ ALHTARVAAV KALDKDPA
|
|---|
| |