| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0647 |
|---|
| Symbol | |
|---|
| ID | 7084585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 735070 |
|---|
| End bp | 736425 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643697673 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002354315 |
|---|
| Protein GI | 217969081 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00895] benzoate transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAAAG TAGATGTGCA TCAAACAATC GACGAGGCGA AGTTCAACAA ATTTCACCTG
AACGTGCTGT TCTGGTGTGC GCTCGTCATC ATCTTCGACG GCTACGACCT GGTGATCTAC
GGGGTCGTGC TGCCGGTGCT GATGAAGGAG TGGGACCTCA CGCCGCTGCA GGCGGGCTCG
CTCGGCAGCG CCGCGCTGTT CGGCATGATG TTCGGCGCGC TGATCTTCGG GCCGCTGTCC
GACCGCATCG GCCGCAAGAA GGTGATCATG ATCACGGTGA TCATCTTCAG CGGCGTGACC
TTCCTCAATG GCTTCGCCGA GACGCCCACC CAGTTCGCCG CGATGCGCTT CATCGCCGGC
CTCGGCATCG GCGGCGTGAT GCCCAACGTG GTCGCGCTGA TGACCGAGTA CATGCCCAGG
AAGATCCGCA GCACCATGGT CGCGGTGATG TTCAGCGGCT ACTCGGTCGG CGGCATGACC
TCGGCCTTCC TCGGCATGTA CCTGATGCCC AGCCACGGCT GGCAGTCGGT GTTCTTCGTC
GCCGGCATCC CGCTGCTGCT GCTGCCGCTG ATCTGGATCT TCCTCCCCGA GGCCGTCGGC
TTCCTGCTCA AGGAAGGTCG CAAGGAAGAG GCTGGCCGCC TGCTCGCCCG CGTCGAGCCG
TCCTACTCGC CCGCGGCCGG CGACAACTTC CACCTGGTCA CCGGCCAGGG CAGGAGCGTC
GCCCTGGTCG CGCTGTTCCA GAACGGTCGC CTGGTCAGCA CGCTGATGTT CTGGGTCGCC
TTCTTCAGCT GCCTGCTGAT GGTGTATGCG CTCGGCTCCT GGCTGCCGAA GCTGATGAAC
AAGGCCGGCT ACGAGCTCGG CTCCAGCCTG AGCTTCCTGC TGGTGCTCAA CTTCGGTGCG
ATCTTCGGCG CGATCGGCGG CGGCTGGCTG GCGGACCGCT TCCACCTGCG CCGGGTGCTG
ACCATCATGT TCGTGATCGC GGCGCTGTCG ATCAGCGCGC TCGCGATCAA GAACGACATG
ATCGTCCTCT ACCTGCTGGT GGCGATCGCC GGTGCGACCA CGATCGGCTC GCAGATCCTG
CTCTACGCCT ACGTCGCGCA GTACTATCCG CTGGCGATCC GCTCCACCGG CATCGGCTGG
GCCTCGGGCG TGGGGCGCCT GGGGGCGATT TCGGGGCCGA TGCTGGGCGG TGCGCTGATC
TCGCTGCCGC TGGAGATGAA CTTCCTCGCC TTCGCCATCC CGGGTGCGGT CGCCGGCCTG
GCGATCTCCA TGGTCGGGCG CAGCGCGGTG CATGCGCCGG AAGAGGAGAA GAACCTCGCC
TTCGTGGGCG AGACCGGCAA GCTCGAGGTG GATTGA
|
|---|
| Protein sequence | MRKVDVHQTI DEAKFNKFHL NVLFWCALVI IFDGYDLVIY GVVLPVLMKE WDLTPLQAGS
LGSAALFGMM FGALIFGPLS DRIGRKKVIM ITVIIFSGVT FLNGFAETPT QFAAMRFIAG
LGIGGVMPNV VALMTEYMPR KIRSTMVAVM FSGYSVGGMT SAFLGMYLMP SHGWQSVFFV
AGIPLLLLPL IWIFLPEAVG FLLKEGRKEE AGRLLARVEP SYSPAAGDNF HLVTGQGRSV
ALVALFQNGR LVSTLMFWVA FFSCLLMVYA LGSWLPKLMN KAGYELGSSL SFLLVLNFGA
IFGAIGGGWL ADRFHLRRVL TIMFVIAALS ISALAIKNDM IVLYLLVAIA GATTIGSQIL
LYAYVAQYYP LAIRSTGIGW ASGVGRLGAI SGPMLGGALI SLPLEMNFLA FAIPGAVAGL
AISMVGRSAV HAPEEEKNLA FVGETGKLEV D
|
|---|
| |