| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0606 |
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| Symbol | metH |
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| ID | 7084544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thauera sp. MZ1T |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011662 |
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| Strand | + |
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| Start bp | 682965 |
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| End bp | 686663 |
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| Gene Length | 3699 bp |
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| Protein Length | 1232 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643697633 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_002354275 |
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| Protein GI | 217969041 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCCG ACCGCAGCAT CGAACTCCGC CAGCTTCTCG CCGAGCGCAT CCTGATCCTG
GACGGCGCCA TGGGCACGAT GATCCAGCAG GAGAAGCTGG GCGAGGCGGA CTACCGCGGC
GAGCGCTTCC TCGACCACCC CAAGGACCTC AAGGGCAACA ACGATCTGCT GGTGCTCACG
CGTCCGGACG TGGTCGCCGG TATCCATCGC GCCTACCTCG AGGCTGGCGC CGACCTCATC
GAGACCAACA CCTTCAACGC CACCCGCGTG TCGCAGGCGG AGTACGGCCT GGAGGCGCTG
GCCTACGAGC TCAACGTCGA GGGCGCCCGC CTGGTGCGCC GGCTGTGCGA CGAATACACC
GCAAAGGACC CCGCCAGGCC GCGCTTCTGC GCCGGCGTGC TCGGGCCGAC CTCGCGCACG
CTGTCGATCT CGCCCGATGT GAACGATCCC GGCTACCGCA ACATCAGCTT CGATGCGCTT
GCCGACGACT ACTACGCCTC GGCGAAGGGC CTGCTCGAAG GCGGTGCCGA CATCCTGCTG
ATCGAGACCA TCTTCGATAC GCTGAATGCC AAGGCGGCGG TGTTCGCGAT CGAGAAGCTG
TTCGAGGACC TCGGCCGGCG CTGGCCGGTG ATGATCTCCG GCACCATCAC CGACGCCTCG
GGCCGCACGC TGTCGGGCCA GACCGCGGAG GCCTTCTGGA ACTCGCTCGG CCACGCGCAG
CCGATCAGCT TCGGCCTCAA CTGCGCGCTC GGCGCCGACC AGCTGCGCCA GTACGTCGAG
GAACTCTCCA CCGCCTGCGA CACCCACGTG TCCGCCCACC CCAACGCCGG CCTGCCCAAC
CCGCTGTCGC CCACCGGCTA CGACGAGACG CCCGAGCACC TCGCCGGCCA GATTCGCGAG
TGGGCGCAGA GCGGCCTGGT GAACATCGTC GGCGGCTGCT GCGGCACCAC GCCGGCGCAC
ATCGCGGCGA TCGCCGAAGC GGTCCGGGGC CTGGCGCCGC GCGCCGTGCC GGTGCTGGAG
AAAAAGCTGC GCCTGTCCGG GCTGGAGCCC TTCAACGTCG GCGGCGACAG TCTTTTCGTC
AACGTCGGCG AGCGCACCAA CGTCACCGGT TCCAAGGCCT TCGCGCGCAT GATCCTCGAG
GGCCGCTTCG ACGACGCGCT CGCGGTGGCG CGCCAGCAGG TCGAAAACGG TGCCCAGGTC
ATCGACATCA ACATGGACGA GGCGATGCTG GATTCGGTCG CCGCCATGGA GCGCTTCTGC
AAGTTGATCG CCACCGAGCC CGACATCTCG CGTGTGCCGA TCATGCTCGA CTCGTCGAAG
TGGTCGGTGA TCGAGGCCGG CCTCAAGTGC ATCCAGGGCA AGGGCGTGGT CAACTCGATC
TCGATGAAGG AGGGCGAGGC AGAGTTCCTG CGCCAGGCGC GGCTCGCACG CCGCTATGGT
GCGGCAGTGA TCGTGATGGC CTTCGACGAA AAGGGTCAGG CCGACACCTT CCGCCGCAAG
ACCGAGATCT GCGAGCGCGC CTACAGGCTG CTGGTGAAGC CGGTGGCCGA GGGCGGCGCC
GGCTTCCCGG CCGAGGACAT CATCTTCGAC CCCAACATCT TCGCCATCGC CACCGGCATC
GAGGAGCACG ACAACTACGC GGTCGACTTC ATCAACGCGG TGGCCTGGAT CAAGGAGAAC
CTGCCGTACG CCAAGACCTC GGGCGGGGTG TCGAACGTGT CCTTCAGCTT CCGCGGCAAC
GACCCGGTGC GCGAGGCGAT CCACACCGTG TTCCTCTACC ACGCGATCAA GGCCGGCTTG
TCGATGGGCA TCGTCAATGC CGGCCAGCTC GGCGTCTATG ACGAGCTCGC GCCCGAGCTG
CGCGACAAGG TCGAGGACGT GGTGATGAAC CGCAAGCCCG GGGCGGGCGA GGCGCTGGTC
GAGTTCGCGC AGACGGTGAA GGGCCAGGCC AAGGAGTCCG CGCAGGACCT CGCCTGGCGC
GAGTGGGCGG TCGAGGAGCG CTTGAGCCAC GCGCTGGTCA AGGGCATCAC CGAGTTCGTC
GTCGCCGATA CCGAGGAGGT GAGGGCGAAG CTGGAGGCCG CGGGCAAGCC GCCGCTGGCG
GTGATCGAGG GCCCGCTGAT GGCCGGCATG AACGTGGTCG GCGACCTCTT CGGCGCGGGC
AAGATGTTCC TGCCCCAGGT GGTGAAGTCG GCGCGCGTCA TGAAGCAGGC GGTGGCGCAC
CTGATCCCCT ACATCGAGGC CGAGAAGCTG CGCACCGGCG CCAGCAGCAA GGGCCGTATC
GTCGTCGCCA CGGTCAAGGG CGACGTGCAC GACATCGGCA AGAACATCGT CGGCGTGGTG
CTCGGCTGCA ATGGCTACGA GGTGATCGAC CTCGGCGTGA TGGTGCCGGC AGCGAAGATC
CTCGAGGCGG CGAAGGAGCA CGGCGCGCAG GCGATCGGCC TGTCCGGCCT GATCACGCCC
TCGCTCGAGG AGATGGCCCA CGTCGCCGCC GAGATGAAGC GCCAGGGCTT TTCCGTGCCG
CTGCTGATCG GCGGCGCCAC CACCAGCCGC AACCACACCG CGATCAAGAT CGCGCCGCAC
TACGATCAGC CGGTGGTGTA CGTGCCCGAC GCCTCGCGTG CGGTGGGCGT GGTCACCGCG
CTGCTGTCCG AAGGCCGGAG CGAGGCCTTC AAGGCCGAGG TCGCCGCCGA CTACGAGAAG
ATCCGCGCGC TGCACGCCAA CAAGAAGGGC ATGCAGTTGG TGAGCCTCGA GGCTGCGCGC
GCCAACGCCT TCCGCGTCGC CTCCGAATAC CAGCCGCCGC GCCCGAACAT GCTGGGCGTG
CAGGCGATCG ACGTCGAGCT CGGCGAGCTG GTCGACTACA TCGACTGGGG CCCGTTCTTC
CAGACCTGGG ACCTCGCCGG CCGCTTCCCC GCCATCCTCG ACGACGAAGT GGTGGGTGAG
GCCGCGCGCA ACGTGTTCGC CGACGGCAAG GCGATGCTGG ACAAGATCGT CGCCGAGGAG
TGGCTGCAGG CGAAGGCGGT GTTCGGCCTG TTCCCGGCCA ACGCGGTGGG CGACGACATC
GAGCTCTACA CCGGCGAGGA CCGCAAGCAC CTGGCCATGG TGTGGCACGG CCTGCGTCAG
CAGCACGAGC GCCCGGCGGG CAAGCCGCAC TGGTGCCTCG CGGACTTCGT CGCGCCCAAG
GACTCGGGCG TGCCCGACTG GGTCGGCGCC TTCGCGGTGA CCGCCGGCCT CGGCATCGAG
CCCAGGGTCG CCGCGTTCGA GGCCGCGCAC GACGACTACC ACGCGATCAT GTTGAAGAGC
CTGGCCGACC GCCTCGCCGA GGCCTGCGCC GAGTGGCTGC ACGAGCGCGT GCGCCGCGAG
TGCTGGGGCT ACGCCGCCGA CGAGACGCTC GACAACGCCG CGCTGATCGC CGAGCAGTAC
CGCGGCATCC GCCCGGCGCC GGGCTATCCG GCCTGCCCGG ACCACACCGT CAAGGGTCCG
CTGTTCGAGC TCCTCGGCGC GCGCGAGCGC ATCGGCATGG AGCTCACCGA GAGCTACGCG
ATGATGCCGG CGGCGGCGGT GAGCGGCTTC TACTTCGCCC ACCCCGAGAG CCACTATTTC
GCGATCTCGA AGATCGGCCG CGACCAGCTC GAGGACTGGG CGCGCCGTAC CGGCATGGAG
GTCGACGAAG CCGCGCGCTG GCTGGCGCCG CTGCTCTGA
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| Protein sequence | MQADRSIELR QLLAERILIL DGAMGTMIQQ EKLGEADYRG ERFLDHPKDL KGNNDLLVLT
RPDVVAGIHR AYLEAGADLI ETNTFNATRV SQAEYGLEAL AYELNVEGAR LVRRLCDEYT
AKDPARPRFC AGVLGPTSRT LSISPDVNDP GYRNISFDAL ADDYYASAKG LLEGGADILL
IETIFDTLNA KAAVFAIEKL FEDLGRRWPV MISGTITDAS GRTLSGQTAE AFWNSLGHAQ
PISFGLNCAL GADQLRQYVE ELSTACDTHV SAHPNAGLPN PLSPTGYDET PEHLAGQIRE
WAQSGLVNIV GGCCGTTPAH IAAIAEAVRG LAPRAVPVLE KKLRLSGLEP FNVGGDSLFV
NVGERTNVTG SKAFARMILE GRFDDALAVA RQQVENGAQV IDINMDEAML DSVAAMERFC
KLIATEPDIS RVPIMLDSSK WSVIEAGLKC IQGKGVVNSI SMKEGEAEFL RQARLARRYG
AAVIVMAFDE KGQADTFRRK TEICERAYRL LVKPVAEGGA GFPAEDIIFD PNIFAIATGI
EEHDNYAVDF INAVAWIKEN LPYAKTSGGV SNVSFSFRGN DPVREAIHTV FLYHAIKAGL
SMGIVNAGQL GVYDELAPEL RDKVEDVVMN RKPGAGEALV EFAQTVKGQA KESAQDLAWR
EWAVEERLSH ALVKGITEFV VADTEEVRAK LEAAGKPPLA VIEGPLMAGM NVVGDLFGAG
KMFLPQVVKS ARVMKQAVAH LIPYIEAEKL RTGASSKGRI VVATVKGDVH DIGKNIVGVV
LGCNGYEVID LGVMVPAAKI LEAAKEHGAQ AIGLSGLITP SLEEMAHVAA EMKRQGFSVP
LLIGGATTSR NHTAIKIAPH YDQPVVYVPD ASRAVGVVTA LLSEGRSEAF KAEVAADYEK
IRALHANKKG MQLVSLEAAR ANAFRVASEY QPPRPNMLGV QAIDVELGEL VDYIDWGPFF
QTWDLAGRFP AILDDEVVGE AARNVFADGK AMLDKIVAEE WLQAKAVFGL FPANAVGDDI
ELYTGEDRKH LAMVWHGLRQ QHERPAGKPH WCLADFVAPK DSGVPDWVGA FAVTAGLGIE
PRVAAFEAAH DDYHAIMLKS LADRLAEACA EWLHERVRRE CWGYAADETL DNAALIAEQY
RGIRPAPGYP ACPDHTVKGP LFELLGARER IGMELTESYA MMPAAAVSGF YFAHPESHYF
AISKIGRDQL EDWARRTGME VDEAARWLAP LL
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