| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmz1t_0599 |
|---|
| Symbol | |
|---|
| ID | 7084537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thauera sp. MZ1T |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011662 |
|---|
| Strand | + |
|---|
| Start bp | 676735 |
|---|
| End bp | 677574 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643697626 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002354268 |
|---|
| Protein GI | 217969034 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAG TGGATGGCCT GGTCAAAGCC TTCGGCGGCT TCCATGCCGT GGATGGCTGC
ACCCTGCGGG TGGCCAAGGG CGAGATCCTC GGCCTCATCG GCCCCAACGG CGCGGGCAAG
ACCACGCTGT TCAACCTGGT CGCCGGCGCC CTGCAGCCGA CCGCGGGCAC CATCCGCTTC
CTCGGCGAGG ACATCACCGC GCTGCCTACC GACGCGCGCT TCCACAAAGG CCTGGTACGC
ACCTTCCAGA TCCCCCACGA GTTCCACAAC CTCACCGCGC GCGAGAATCT GATGATGGTG
CCGCCGCGGC AACCCGGCGA GAACCTCTTC GCCAACTGGT TCGCCGCCGG CAAGGTGCGC
GCGGCCGAAG AGGCGGTGCG CCAGAAGGCC GACGACACGC TCGCCTTCCT GGAACTGACT
CACGTCGCCG ACGAGCGCGC GGGCAACCTG TCCGGCGGGC AGAAGAAACT GCTCGAGCTC
GGCCGCACGA TGATGACCGA CGCCAAACTG GTGTTGCTCG ACGAGCCCGC CGCCGGTGTC
AACCGCACCC TGCTGCGCAA GCTCGAGGAG AAGATCCTCA TCCTCAACCG CGAGCGCGGC
TACACCTTCA TCCTCATCGA GCACGACATG GAGATGATCG AGAAGCTGTG CGCTCCGGTG
GTGTGCATGG CCGAGGGCAA GGTGCTGATC CAGGGCGATT TCCATACAGT GCGCTCCGAT
TCCCGCGTGC TCGAGGCCTA CCTCGGCGAG ACGCCGACCG CGGTCGAGCG CGAGGCTGCC
GAGCACGACC CCAAGGTCGA GGAACTGCGC GAGCAGGAAC TGCACCGGGA GGACCTGTGA
|
|---|
| Protein sequence | MLEVDGLVKA FGGFHAVDGC TLRVAKGEIL GLIGPNGAGK TTLFNLVAGA LQPTAGTIRF
LGEDITALPT DARFHKGLVR TFQIPHEFHN LTARENLMMV PPRQPGENLF ANWFAAGKVR
AAEEAVRQKA DDTLAFLELT HVADERAGNL SGGQKKLLEL GRTMMTDAKL VLLDEPAAGV
NRTLLRKLEE KILILNRERG YTFILIEHDM EMIEKLCAPV VCMAEGKVLI QGDFHTVRSD
SRVLEAYLGE TPTAVEREAA EHDPKVEELR EQELHREDL
|
|---|
| |